Pseudoalteromonas nigrifaciens: PNIG_a3694
Help
Entry
PNIG_a3694 CDS
T05271
Symbol
birA
Name
(GenBank) BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00780
Biotin metabolism
png01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
PNIG_a3694 (birA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
png03000
]
PNIG_a3694 (birA)
Enzymes [BR:
png01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
PNIG_a3694 (birA)
Transcription factors [BR:
png03000
]
Prokaryotic type
Helix-turn-helix
Other families
PNIG_a3694 (birA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_LplA_LipB_2
HTH_24
BPL_C
MarR_2
HTH_5
HTH_20
HTH_AsnC-type
HTH_Crp_2
HTH_1
HTH_34
HTH_DeoR
MarR
Fe_dep_repress
HTH_10
HTH_28
HTH_36
Longin_2
Motif
Other DBs
NCBI-ProteinID:
ASM55554
UniProt:
A0A379HGH4
LinkDB
All DBs
Position
I:complement(3387694..3388686)
Genome browser
AA seq
330 aa
AA seq
DB search
MKAPDGNKLAILNALNQGGFISGQVLGEQLGISRAAISKHIKSLQEMGLDIFKVTGKGYS
LNSQVGLLNQAQIQQHYQALGATTAKVEVHPIIDSTNSELMRRIQAKTELESGTVIVAEM
QQLGRGRRGRVWQSPFGANLYYSYFWRLDDGIQAAMGVSIVVGLAVYDAIKALYNIEVEL
KWPNDIYLNKQKLAGVLVELDAQPQGPCQLVIGIGINLQMPESFSQHIDQAWTDLSQHTQ
QLNKNQLVASLTYHLEQRLEQYSESGLQSMHQQWNALNAFAGECVELNTGHRSWRGICEG
IDSQGGIRIRQDGEVKSYYGGEISLRKAQL
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcacccgatgggaataaactcgccattttaaatgccctcaatcaaggtggtttt
atttcagggcaggtattaggcgagcaactgggtattagccgcgcagctattagtaagcat
attaaaagcttacaagaaatgggcttagatatttttaaggtaactggtaaaggttacagc
ttaaatagccaagtcggactgttaaaccaagcgcaaatacaacaacactatcaagcgtta
ggtgcaactaccgccaaagtagaagtacaccccataatagactccactaatagtgagcta
atgcgccgcatacaagcaaaaactgagcttgaatcgggtactgttattgtggccgaaatg
cagcagttggggcgtgggcgtcggggccgggtttggcagtcgccatttggagccaactta
tattatagttacttttggcgcttagatgatggcatacaagccgctatgggcgtatctata
gtggttggcttagctgtatatgatgctattaaagcgctatacaacatagaagtagagcta
aaatggcctaacgatatttacctcaataaacaaaagctcgctggcgtattagttgagctc
gacgcgcaaccgcaaggtccttgtcagttagttataggcataggtattaacttacaaatg
ccagagagctttagtcagcacattgatcaagcatggactgatttaagtcaacatacgcag
cagcttaataaaaatcagttggttgcctcgcttacttatcatttagagcagcgtttagag
cagtatagtgaaagcggtttacagagcatgcatcagcaatggaatgctttaaatgcattt
gctggtgaatgtgtagagctaaataccggacatcgtagttggcgcggaatatgtgaggga
atagactcacaaggcggaattcgtattcgccaagatggtgaagtaaaaagctattacggc
ggcgaaatttcgctcagaaaggcgcaactatga
DBGET
integrated database retrieval system
