Pseudoalteromonas nigrifaciens: PNIG_b0536
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Entry
PNIG_b0536 CDS
T05271
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
png00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PNIG_b0536 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
png03400
]
PNIG_b0536 (uvrA)
DNA repair and recombination proteins [BR:
png03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PNIG_b0536 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PNIG_b0536 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
AAA_29
nSTAND1
AAA_16
RsgA_GTPase
DnaJ_CXXCXGXG
DUF4350
SLFN-g3_helicase
Viral_helicase1
MCR
Motif
Other DBs
NCBI-ProteinID:
ASM56106
UniProt:
A0A379I488
LinkDB
All DBs
Position
II:complement(489466..492030)
Genome browser
AA seq
854 aa
AA seq
DB search
MSSTSKNATQSVNHTPQQQTHSISNALEHCIQVRGARVHNLKNVDVDLPRNALIVFTGIS
GSGKSSLAFGTLFAESQRRYLDSVSPYARRLIDQVDEPDVDDINGLPPAVALQQQRGTPS
VRSSVGSVTTISNTLRMLYSRAGDYPSGQNILYADAFSPNTPQGACTLCHGIGRVFAVTE
KLLVPDDTKTIRERAIAAWPPAWQGQNLSRILVSLGYDIDTPWKLLPKKTRDWILFTDET
PVVPVYPQYSKEQTRNAIEKNEKPSYMGTYSSAKRFILHSFATTQSPRTKKRVSQFMQIS
ECPDCKGKKLKQQSLSVKFTGLDIGELSQLTLTELALRLRDIANIKPTQNAPNREKAIVA
QRIASDILARVEALTTLGLGYLSLQRTTPTLSAGELQRLRLATQIRSQLFGVVYVLDEPS
AGLHPADTQALLGALDQLIAAGNSVFVVEHDINVIKHADWIVDVGPDAGTHGGEVIYSGP
ISGLQGVAKSHTARFLFTADAITKHTCRQPQAWLKLAAIERNNLQKLDVEFPLGVMTTVT
GVSGSGKSSLISQALVDLVYDALGQKATLESPTDEAELLEQELEIPTGGQITDGMQHVKR
LVNVDQKAIGRTPRSNLATYTGLFDHVRKLFASTNKSKARRYDMGRFSFNVKKGRCANCE
GVGFVSVELLFLPSVYSQCQVCQGQRYNEQTLEVYYRDKNIAQVLDLTVESAHQFFIDEP
QISRALDTLLQVGLGYLRLGQPATELSGGEAQRIKLATELQRIQRGDTLYVLDEPTTGLH
PADIAMLMVQLNKLVDAGNTVIMVEHDMQVASNSDWVIDMGPSAGDHGGQIVAQGSPAQV
AKSKASQTAPFLLA
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtaccagcaaaaacgcaacacagtctgtcaaccacacgcctcaacagcaaaca
cacagcatttccaatgcacttgagcactgtattcaggtccgaggcgcgcgggttcacaat
ttaaaaaatgttgatgtagacttaccccgcaatgcactcatcgtttttactggtatatcg
ggttctggaaaatcatctcttgcttttggcaccttgtttgccgagtcacaacgccgctat
ctcgattcagtatcgccttacgcgcgaagattaattgaccaagtagatgagcccgatgta
gatgacataaacggcctacctcctgcagtagcactgcaacaacaacgaggcaccccatcg
gttcgctcatctgtgggaagtgtaactactatttctaataccctgcgaatgctctactct
cgtgcaggcgactaccctagcggtcaaaatatactctacgccgacgccttttcacctaac
accccacaaggtgcctgcaccttgtgtcatggtattggccgagtgtttgcagtaactgaa
aagttacttgtacctgatgatacaaaaacaattcgcgagcgcgccatagctgcatggcca
cctgcgtggcaaggacaaaacctcagccgtatacttgtatctcttggttatgacattgat
acaccatggaaattactccctaaaaaaacccgcgattggattctatttaccgacgaaact
cccgttgtacctgtttatccgcaatatagcaaagagcaaactcgcaacgccattgaaaaa
aatgagaagccgagttacatgggtacatactcaagtgctaaacgttttattttgcactct
tttgctaccacgcaaagcccgcgaactaaaaaacgcgtatcacagtttatgcaaatttcg
gaatgccctgattgcaaaggtaaaaaattaaaacagcaatccttgtcggtcaagtttaca
ggccttgatattggtgagttatcacaattaacactaacagagctagcactgcgattacgt
gatattgctaacataaagccaacccaaaatgcgcccaatagagaaaaagcaattgtagct
cagcgaattgccagcgacattttggcccgagtagaggcactcacaacgcttggcttaggg
tatctgtcgttgcaacgtaccacacctactttatctgcaggcgaactgcaacgtttacga
ctagcaacccaaattcgttcacaactgtttggtgtggtttatgttttagatgaaccctcg
gcaggactacatccagcagatacccaagcattgcttggggcgcttgatcaactcattgca
gctggtaactctgtatttgttgtagaacacgatattaacgtgattaaacatgccgattgg
attgttgatgttggtccagatgctggtacgcatggcggtgaagtgatttacagcggccct
attagtggtttacaaggcgttgctaaatctcataccgctcgatttttatttactgcagac
gcgataaccaaacacacttgcagacaacctcaagcctggctaaagctcgcagcaattgag
cgtaataacttacaaaaattagatgttgaatttccattgggcgtaatgacaaccgttacc
ggcgtttctggttcgggtaaatcaagcctcattagtcaagctttagtagatctggtctat
gatgcgttaggacaaaaagctactttagagagcccaactgacgaagccgagttattagag
caagaactagaaattcccactggcgggcaaattacagatggcatgcagcacgtaaaacgt
ctagtaaatgtagaccaaaaggcaatcgggcgtacacccagatcaaacctcgccacctat
actggcttatttgatcacgtccgcaaattatttgcatccactaacaagtctaaagctcga
cgctacgatatgggccgcttttcgttcaacgttaaaaaaggccgctgtgctaattgtgag
ggtgtggggtttgttagtgttgagctgttatttttgccaagtgtttattcacagtgccaa
gtatgccaaggccagcgttataacgagcaaacacttgaagtgtattatcgcgataaaaac
attgctcaagtactcgatttaacggttgaatctgcacatcaattttttatagatgaacca
caaatatcgcgagctttggacactttgttacaagtaggcctaggatatttacgcctcggc
cagccagcaaccgagttatctggcggcgaagcccagcgtattaaacttgcaaccgaatta
cagcgcatacaacgcggtgatactctttatgtacttgatgagcctactaccggcctgcat
ccagctgatatagcaatgctgatggtgcaattaaataagcttgtagatgcaggtaatacc
gttattatggtcgaacatgatatgcaggttgccagtaatagcgattgggttatcgacatg
ggccccagtgcgggtgatcatggcggacaaattgttgctcaaggctcccctgcacaggtc
gcaaagtcaaaagccagccaaacagctccctttttattagcctaa
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