Pseudoalteromonas nigrifaciens: PNIG_b0678
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Entry
PNIG_b0678 CDS
T05271
Symbol
fadD
Name
(GenBank) long-chain acyl-CoA synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
png
Pseudoalteromonas nigrifaciens
Pathway
png00061
Fatty acid biosynthesis
png00071
Fatty acid degradation
png01100
Metabolic pathways
png01212
Fatty acid metabolism
png02024
Quorum sensing
png04146
Peroxisome
Module
png_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
png00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
PNIG_b0678 (fadD)
00071 Fatty acid degradation
PNIG_b0678 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
PNIG_b0678 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
PNIG_b0678 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
png01004
]
PNIG_b0678 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
png04147
]
PNIG_b0678 (fadD)
Enzymes [BR:
png01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
PNIG_b0678 (fadD)
Lipid biosynthesis proteins [BR:
png01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
PNIG_b0678 (fadD)
Exosome [BR:
png04147
]
Exosomal proteins
Exosomal proteins of breast milk
PNIG_b0678 (fadD)
Exosomal proteins of breast cancer cells
PNIG_b0678 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
ASM56224
UniProt:
A0AAC9XZU3
LinkDB
All DBs
Position
II:610469..612121
Genome browser
AA seq
550 aa
AA seq
DB search
MEKIWLKRYPEGMPETIDPEHYASLLEVFEKSFTDYKDLPAFTNMGKTLSYDEIDTATKK
VASYIQNDLGLKKCDKVAVMMPNLLQTPIAILGILRAGCVVVNVNPLYTVRELEHQLKDS
DTSAIFILANFADTLEKALPHTDVKHIVVTQVGDMMGGIKKHVVNFVVKYIKKMVPSYTL
PNTIDFCDLLKADENAYVRPEVNLSDLAFLQYTGGTTGVSKGAMLSHGNMVGNLEQVSGC
LDPVLERGKEVVITALPLYHIFALTANCLTFMKYGGLNVLITNPRDMPGFIKELSKAKFT
AITGVNTLFNGLLNTPGFAELDFSHLKMSLGGGMAVQRPVAEKWQTVTKSKLMEGYGLTE
CSPLVTVSPYDLTAYNGSIGLPAPSTEIKLILDNGQEAAKGEPGELWVKGPQVMLGYYKR
PDATAESLQDGWFATGDIATYDDEGFFYIVDRKKDMIIVSGFNVFPNEIEEVVAMHDGVL
EVAAIGIPHDTSGEQVKVFVVKKDPSLTEKDIIKHCRDNLTNYKVPKLVEFRDELPKTNV
GKILRRALKD
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaaatttggcttaagcgctacccagaaggtatgcctgaaactatcgatcctgag
cactatgcctcattactcgaagtgtttgaaaaaagttttaccgactacaaagatttacct
gcatttacaaatatgggtaaaaccttgtcttatgatgaaattgatactgcaactaaaaaa
gttgcgtcttatattcaaaatgatttaggccttaaaaaatgtgacaaagtggcagttatg
atgcctaatttgttacaaacgcccattgctattttaggtattttacgtgcaggctgtgtt
gttgttaatgtaaacccactctacacagtgcgtgaacttgagcaccaactcaaagattct
gatacttcagcaatttttatattggctaactttgccgatacactcgaaaaagcgctaccg
cataccgatgttaaacatattgttgttacccaagtaggtgacatgatgggtggcattaaa
aagcatgttgtaaactttgttgttaagtacattaaaaagatggtgccaagctacactttg
ccaaataccatagatttttgcgacttacttaaagccgacgaaaatgcctatgtacgtcca
gaggttaacttaagtgatttagcttttttacaatataccggtggaacaacgggtgtatct
aaaggcgcaatgttaagccacggtaatatggtaggtaatcttgagcaagtttcaggatgt
ttagacccagtgcttgagcgcggtaaagaagtggtaataactgcgttaccgctttaccat
atttttgcattaacggctaactgcttaacatttatgaagtacggtggcctaaatgtactt
ataactaacccacgcgacatgcctggttttattaaagaattaagtaaagctaaatttact
gctattacgggtgtaaatactttatttaatggtttgttaaacacgccaggatttgccgaa
cttgattttagtcacttaaaaatgtcattaggcggcggtatggctgtacaacgcccagtt
gctgaaaaatggcaaacagttacaaaatctaaattaatggaagggtatggtttaaccgag
tgttctcctttagttaccgttagtccttatgacttaacggcatataatggctcaattggt
ttaccggctccaagtactgaaatcaaattaattcttgataatggccaagaagcagcaaaa
ggtgaaccaggagagctttgggttaaaggcccgcaagttatgcttggttactacaaacgc
ccagatgcaaccgctgagagcttacaagatggctggtttgctaccggtgacatagcaact
tatgacgacgaaggtttcttttatatagtcgatcgtaaaaaagatatgattattgtctcg
ggctttaatgtattccctaacgaaattgaagaagttgttgccatgcacgacggagtgctt
gaagtagcagctattggtatccctcacgatacgagtggtgaacaagttaaagtttttgtt
gtaaaaaaagacccttctttaactgaaaaagatataataaaacactgtcgtgataattta
actaattataaggtgcctaagcttgttgagtttagggatgagttacctaaaactaacgta
ggtaaaatactcagaagagccttgaaagattag
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