KEGG   Pseudoalteromonas nigrifaciens: PNIG_p0065
Entry
PNIG_p0065        CDS       T05271                                 
Symbol
hsdR
Name
(GenBank) type I restriction enzyme, R subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
png  Pseudoalteromonas nigrifaciens
Brite
KEGG Orthology (KO) [BR:png00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:png02048]
    PNIG_p0065 (hsdR)
Enzymes [BR:png01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     PNIG_p0065 (hsdR)
Prokaryotic defense system [BR:png02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   PNIG_p0065 (hsdR)
SSDB
Motif
Pfam: T1R_D3-like SWI2_SNF2 EcoR124_C ResIII HSDR_N DEAD SAM_DrpA Helicase_C
Other DBs
NCBI-ProteinID: ASM56343
UniProt: A0AAC9Y019
LinkDB
Position
unnamed:complement(57664..60552)
AA seq 962 aa
MTYQSEQQLEDDLIAQLSEQGFTRVVLKDNAALEANLKHQLEKVNNCKLSDTEFTQILGK
LGKGNIFAKAKILRDQLDVALDDGDSMHLTLLFDDPQQNSFQVAQQITIKGTYTNRYDVT
LLVNGFPLVQVELKRRGIELKEAFNQIKRYQKHSFHANHGLFNYVQLFVMSNGVNSQYFS
NNSEMSAKQTFDWTDSENNKISQLHDFAEAFLTPSHLTHMLTKYIVLNETGKYLMVLRPY
QFYAVEAIVEQVKTTTDNGYIWHTTGSGKTLTSFKAAQIMTSLSEVDKVVFVVDRKDLDY
QTALEFNAFVKGSVDSTDNTSMLFHQLLDKPMKGRKVNQNRNTKLVVTTLQKLNNVVTKQ
RYLKEMQSLQDKRIVFIFDECHRSQFGDTHKNITEFFNNAQLFGFTGTPIFADNAVAKNS
VKRTTKDLFGECLHPYVIVDAIRDANVLKFAIEYVGRYQYKDGSNNNLDIEVEDIDTKEL
LTSPARLDKITDYIISQHNRKTHSREFNAMFCVSSVAELIQYYELFAAKKAQGKHNLKIA
TIFSYEANEEEEYELGNSDAPRIKETSVKYLNEGQAVKLHSRDKLDSFINDYNAMFGTSY
STKDGKLFDDYYKNISKRVKAKEIDILLVVNMFLTGFDAPKLNTLYVDKNLKYHGLVQAF
SRTNRLLGETKSHGNIVCFRNLKKAADIAFTLFSNKQPKEYIETPSYNELLADFNDAYGA
LIAITPTVDSVDTLPDEEAQALFVRQFRELMRLKNMLSNFADFDMDSTAMGEQEFQDYTS
KYADLGRQLRENSSKEKVSVLDDVDFELELLHSDIVNVTYILQLLRELHGEESGDEKARK
RQVIANLIATDPTLLSKKALIDKFMDEHLQGIPASADVDEEFELYWEKEKRLELEKFAHE
QKLNQERLEKLVTRYELSDEMPLRDDFADVLETKPSLLQRRKMLPVITDKFKHFVDTFIA
GF
NT seq 2889 nt   +upstreamnt  +downstreamnt
atgacttaccaaagtgaacaacaattagaagatgacttaattgcacaacttagcgagcaa
ggttttacgcgcgtagttttaaaggataacgccgctcttgaagctaaccttaaacaccag
ctagaaaaagtaaataactgcaagctgagtgatactgagtttacacaaatactcggtaag
cttggtaaaggtaatatatttgctaaagccaaaatactgcgcgaccagcttgatgtagca
cttgatgatggcgacagcatgcacttaaccttgttgttcgatgatccgcagcaaaacagc
tttcaggtagctcagcaaataacgataaagggcacgtacactaaccgatacgatgtaacg
ctattagtgaatggttttccgctggtacaagtagaattaaagcgccgtggtattgaacta
aaagaagcgtttaaccaaattaagcgttatcaaaagcattcgtttcatgccaaccatggt
ttgtttaactatgtgcagctgtttgttatgtcgaatggagttaatagccagtacttttct
aacaacagtgaaatgtcggctaagcaaacctttgactggactgatagcgaaaacaataaa
ataagccagttgcatgactttgccgaagcgtttttaacgccttcccacctaacgcatatg
ctcactaagtacattgtgcttaatgaaacaggtaagtacttaatggtgcttaggccgtac
cagttttatgcagttgaggcgattgtagagcaagttaaaaccacaactgataatggctat
atttggcatacaacgggctcaggtaaaacattaacctcgtttaaagccgcacagattatg
acctctctgagtgaggttgataaagttgtgtttgtagttgaccgtaaagacctagactac
caaacagcgcttgagtttaatgcgtttgtaaagggctctgtagacagcactgacaacaca
agtatgttgttccaccagctgttagataagcctatgaaaggcagaaaagttaaccaaaac
cgtaatactaagctggtggtaactacactacaaaagcttaataacgtggtgactaaacag
cgctacttaaaagaaatgcaaagcctgcaggataagcgcattgtgtttatatttgacgag
tgccaccgcagtcaatttggcgatacgcataaaaacattaccgaattttttaataacgcg
cagttgtttggttttacgggtacgcctatatttgccgacaatgccgttgctaaaaattca
gttaagcgcaccactaaagatttgtttggtgaatgcctacacccgtatgtaattgtggat
gcgatacgcgacgctaacgtgcttaagtttgctattgagtatgttgggcgttaccaatac
aaagatggctctaacaacaacctagacattgaagttgaagacatcgacaccaaagagctt
ttaacctctcctgcgcgcttagataaaataaccgattacattatttcccagcataatcgt
aaaacgcatagtcgtgagtttaacgctatgttttgtgtttcaagtgtggctgagcttatt
caatactatgagctatttgcagcgaaaaaggcacagggaaaacataatcttaaaattgcc
accatatttagctatgaggctaatgaagaggaagaatacgaactaggtaatagtgatgca
ccaaggattaaagaaacctctgttaagtatttaaatgaagggcaagccgttaagctacat
agccgcgataagttagactcattcattaacgactacaatgctatgtttggtacaagctac
tccactaaagatggcaagttatttgatgactactacaaaaatatatctaagcgtgttaaa
gccaaagagattgatatattgctggtggtgaatatgtttttaacaggctttgatgcccca
aaactcaatacgttgtacgttgataaaaaccttaaatatcatggtttggtgcaggccttc
tcgcgcaccaaccgattattgggtgaaactaaatcgcacggtaatatagtgtgttttaga
aaccttaaaaaagctgctgacattgcttttacactgttttcaaacaagcagcctaaagaa
tatatagaaaccccttcgtataatgagctgctagccgattttaacgacgcctatggtgcg
ctaatagcaattacgcctaccgttgactcagttgatactttacctgatgaagaagctcag
gcgttgtttgtgaggcagtttcgtgagcttatgcgcttaaagaacatgttaagcaacttt
gctgactttgatatggactctaccgcgatgggcgagcaagagtttcaggattatacgagt
aagtatgccgaccttggcaggcagctacgtgagaactcaagtaaagagaaagtatcggtt
ttagatgacgttgattttgaactagagctactacacagtgatatagtaaatgtaacctat
attttgcagttattacgagagttacacggcgaagaaagcggcgacgaaaaagcccgtaaa
cgtcaagtaatagcaaacctgatagccaccgacccaaccttattaagtaaaaaagcactt
atagataagtttatggatgagcacttacaaggtatacctgccagtgctgacgttgatgaa
gagtttgagctttattgggagaaagaaaagcgcctagagcttgagaagtttgcccacgag
caaaagctaaaccaagaacgcttagaaaagctagtaacgcgttatgagctaagtgacgaa
atgccattaagggatgactttgctgatgtactagaaaccaaacccagccttttacagcgc
agaaaaatgctgcctgtaataacggataaatttaaacactttgttgatacgtttatcgca
gggttttaa

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