Pseudalkalibacillus nanhaiensis: V1497_00020
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Entry
V1497_00020 CDS
T11239
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1497_00020 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_00020 (recF)
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
V1497_00020 (recF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_27
AAA_21
DUF2813
AAA_29
Motif
Other DBs
NCBI-ProteinID:
XNY63179
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All DBs
Position
2711..3832
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AA seq
373 aa
AA seq
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MHLKELQLKNYRNYETEELSFQDNVNVFIGENAQGKTNIMEAIYVLGFAKSHRTPRDKEL
IRWDCEYGKIEGRVQKRNGPLSLQIVISQKGKKAKYNHIEQRRLTDYIGALNIVMFAPED
LNLVKGSPQVRRRFIDMEIGQISPVYLHHLSQYQKILQQRNHLLRDLQRRRKHEQEIMLD
ILTEQLIEHAAKIVHKRHEFLQLLLEWASPIHSGITRKNESLDIEYKSSVQVSDSFDMTK
IIEEYENKFDKIKEKEMERGTTLAGPHRDDLSLYVNGKDVQTYGSQGQQRTTALSLKLAE
IELIKSEVGEYPLLLLDDVLSELDDSRQSHLLNTIQGKVQTFVTTTSVDGIEHETLRNAS
LFNVENGSASLLK
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgcatctaaaggagttacagctaaaaaactatcgaaattacgaaacggaagaattgagc
ttccaggataacgtgaatgttttcatcggggaaaacgctcaaggaaagacgaatatcatg
gaagccatttatgtgttaggattcgcgaaatcccatcgcactcctcgtgataaagaattg
atacgttgggactgtgaatatggtaaaatagaaggtagggtccaaaaaaggaacggtcct
ctatctttacaaatcgttatcagtcaaaaaggtaaaaaggccaagtacaatcatattgaa
caacgaagactgaccgattatatcggcgcattgaacatcgtcatgtttgcacctgaggat
ttgaatctagtcaaagggagccctcaggtgcgacgtcgttttatcgatatggagattggt
cagattagtcctgtctatttacatcatctcagccaatatcaaaagattcttcaacaacgg
aaccatctcctccgtgatcttcagcgtcgaagaaaacatgagcaggaaatcatgttggat
attctgacagagcagctcatcgagcatgccgccaaaatcgtccataaacgtcatgaattc
cttcaattgctgctggaatgggcatcaccgatccattctggtataacgcgcaagaatgag
tctttggatattgaatataaatcttctgtacaggtatcagattcgtttgatatgacgaaa
ataatagaagagtatgagaacaaatttgataaaataaaagaaaaagagatggaacgtggg
acaaccctggcaggaccgcacagggacgatctttctctttatgtgaacgggaaggatgtt
cagacttacggttcacaaggtcagcaacgtacaacagcactttctttgaaactagctgaa
atcgagctgatcaaatcggaggttggcgaatatccactattactgttggatgatgtatta
tctgaactcgacgacagtcgccaatcccatctgttgaacacgatccaagggaaggtgcaa
acattcgtcaccacgacaagtgtagacggaatcgagcacgaaacccttcgaaatgccagt
ttgttcaacgtcgaaaatggaagtgcgtcgctattaaagtga
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