Pseudalkalibacillus nanhaiensis: V1497_00170
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Entry
V1497_00170 CDS
T11239
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh03030
DNA replication
pnh03430
Mismatch repair
pnh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V1497_00170 (dnaX)
03430 Mismatch repair
V1497_00170 (dnaX)
03440 Homologous recombination
V1497_00170 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnh03032
]
V1497_00170 (dnaX)
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_00170 (dnaX)
Enzymes [BR:
pnh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V1497_00170 (dnaX)
DNA replication proteins [BR:
pnh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V1497_00170 (dnaX)
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V1497_00170 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
DnaX_C
RuvB_N
AAA_30
TIP49
AAA_22
AAA_assoc_2
AAA_19
PIF1
AAA_5
Rad17
AAA_14
AAA_16
DNA_pol3_delta_C
TsaE
AAA_2
AAA_7
nSTAND3
RCF1-5-like_lid
RNA_helicase
AAA_18
Mg_chelatase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
XNY63201
LinkDB
All DBs
Position
36404..38143
Genome browser
AA seq
579 aa
AA seq
DB search
MAYQALYRLYRPQQFQDMVGQEHITKTLQNALLQQKLSHAYLFSGPRGTGKTTAAKIIAK
AVNCERAPVEEPCNECEACVGITKGTISDVIEIDAASNNGVDEIRDIRDKVKYAPSAVQY
KVYIIDEVHMLSIGAFNALLKTLEEPPAHVIFILATTEPHKIPLTIISRCQRFDFRRITS
HAIVKRMQTVIESQDVQVEDDALHLVARAAEGGMRDALSILDQAVSYSEETVTVEDVLAV
TGSVSQSFLSEMTNAFRNHNVTDALKQIDQLLEKGKDPIRFINDLIFYYRDMLLYQAAPN
LEEVLNRAQVDQEFEALAKETPADWIYHVIDVLNKAQQEMKWTNHPRIHIELAVVKLCEE
PRSSNASAPDVQPLMNRIDQLEKEIRELKEKGVVSQAAPSAEQEKPKRTFQSKTPKSKAS
TGKIKEMLRSASKKDLQLLRSKWGEIMERIKSRMVNAHAWMINATPVASSDKAFLLAFQH
ELHSQMAVKENIKECVESVVQETLGRPMVMMTILEDDWEQVKKSFIQEQRSSDSVEEADE
QDASGSTENKPEAQQPDNSDPVVDEAIKLFGSDYVEIEE
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcgtatcaagcattataccggctctatcggccccaacaatttcaagatatggtcggg
caggaacatattacgaaaaccttgcagaatgcacttttgcaacaaaagctatcccatgcc
tacctgttcagcggtccgagaggtacaggtaaaacgactgcagcgaaaatcatcgcgaaa
gcggtgaactgtgaacgagcacctgtcgaggaaccatgtaatgaatgtgaagcgtgtgtc
ggaatcacaaaaggaaccatttcggatgtgattgaaatcgatgcggcttccaataacggt
gtcgatgaaattcgcgatatccgggataaagtgaaatacgcaccgagtgctgtccaatat
aaagtgtatatcattgatgaagtacatatgctttccattggagcattcaacgctttactt
aaaacattggaagagccgcctgctcacgtcatcttcattcttgcgactacggaaccgcat
aaaattccgcttacgatcatctctaggtgccaacgattcgattttcggagaatcacaagc
catgccatcgtaaaaaggatgcaaaccgtcatcgagtctcaagatgtccaagtagaagat
gatgccttgcatcttgtggcaagagccgcagaaggtggaatgcgggatgccttgagcata
ctggatcaagctgtttcttatagtgaagagactgtgacggtagaagatgtcctcgctgtg
actggttcggtatcgcaatctttcttatcggaaatgacgaatgcattccgaaaccataat
gtcacggatgctttgaaacagatcgatcaacttcttgaaaaaggaaaagatccgatccgg
ttcatcaacgacctcattttttattatcgtgatatgctcttatatcaggcagcaccaaat
cttgaagaagtactgaatcgggcgcaggtcgaccaagaattcgaagctcttgcaaaagaa
accccggctgattggatctaccatgtcattgatgtgttgaataaagctcagcaagaaatg
aaatggacgaatcatccgaggattcatattgaacttgccgttgttaaactgtgtgaagag
ccccgatcatcaaacgcgtcagcaccagatgtccagcctttgatgaaccgaattgatcag
ctcgaaaaggaaatccgtgagctcaaggaaaaaggcgttgtttcgcaagcagcaccaagt
gccgaacaagaaaaaccgaaaaggacattccaatcgaagacgccgaaatcaaaagcatcc
acaggtaagatcaaagagatgctgagaagcgcttccaagaaggaccttcaattgctcagg
agtaaatggggcgaaatcatggaacgcattaaatcccggatggtcaatgcccacgcctgg
atgatcaatgcaactcctgtagcgagttctgacaaagcattcttgctcgcctttcaacat
gagcttcatagccagatggctgtaaaagaaaacatcaaagaatgtgtcgagtcggtcgta
caagaaacattaggtcgtccgatggtcatgatgacgattcttgaagatgattgggagcaa
gtcaagaaatcctttattcaagaacaacggtcatctgattcggtagaggaagcggatgaa
caagatgcttccggtagtacggaaaataaaccggaagcacaacaacccgacaatagcgat
cctgtggttgatgaagcgatcaagcttttcgggtctgactacgttgaaatagaagaataa
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