Pseudalkalibacillus nanhaiensis: V1497_01450
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Entry
V1497_01450 CDS
T11239
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
pnh Pseudalkalibacillus nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnh03021
]
V1497_01450 (sigB)
Transcription machinery [BR:
pnh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
V1497_01450 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
GerE
Sigma70_ECF
DUF134
HTH_37
DUF1492
HTH_23
HTH_3
HTH_28
Motif
Other DBs
NCBI-ProteinID:
XNY64898
LinkDB
All DBs
Position
254245..254988
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AA seq
247 aa
AA seq
DB search
MLEQLRDDPENQEIQTILVEHYQDLVHSLARKFSKGKSIHDDLVQVGMIGLLAAFRRYDP
EFGRSFESFAVPTIIGEIKRFIRDKTWSVHVPRRIKELSPRIKKAVEVLTNDLQRSPKVA
EIADYLESTEEEVLETMEMGKSYQALSVDSSIEADQEGSTVTLLDLVGSTESGYEQTDQR
MLLQKAFSVLSEREQEILQCTYFENLSQKETGKRLNISQMHVSRLQRRALEKLKDAIRVD
PAEAFND
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgagcaattaagagatgatccagaaaatcaagaaatccaaaccattctcgtggag
cattatcaggatttggtccattctctcgctcgtaagttttcaaaagggaaaagcatccac
gatgacttagtgcaggttggcatgattggtctgctggctgcttttcgtcgttatgacccg
gagttcgggagaagctttgaatcattcgctgtcccgacgatcattggtgaaatcaaacga
ttcatccgagataagacatggagtgtccatgtcccgagaagaatcaaagaattaagccct
agaatcaaaaaggcggtcgaagtactgacgaatgacttgcaacgctcacctaaggttgca
gagattgcggattatctggaatcaacagaagaagaagttttggaaacgatggaaatgggc
aagagttatcaggcattatccgtcgacagttccatcgaggcagatcaagaaggcagtacg
gtaaccttgttagacttggtcggaagtacagaaagtggctatgaacaaactgaccaacga
atgctcctgcaaaaagcattcagtgtcctttcagaacgggagcaggagatccttcaatgc
acgtatttcgaaaacctgagtcagaaggaaacagggaaacggttgaatatatcccaaatg
catgtgtcacgattgcaacgtagagcgcttgaaaaattaaaagatgcgatacgcgtcgat
cctgcggaggcttttaatgattga
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