Pseudalkalibacillus nanhaiensis: V1497_01920
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Entry
V1497_01920 CDS
T11239
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh03420
Nucleotide excision repair
pnh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1497_01920 (pcrA)
03430 Mismatch repair
V1497_01920 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_01920 (pcrA)
Enzymes [BR:
pnh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1497_01920 (pcrA)
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1497_01920 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
V1497_01920 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNY63479
LinkDB
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Position
346981..349206
Genome browser
AA seq
741 aa
AA seq
DB search
MQQIVERLLSGLNPEQKRAVKHTEGPLLIMAGAGSGKTRVLTHRIAYLLIEKGVAPWNIL
AITFTNKAAREMQNRVASITGPAADNIWISTFHSMCVRILRRDSDRIGINRNFTILDSTD
QLSVIKQALKDLNLDTKKFDARSILGTISSAKNELKTASDFKKTAAGMYEEVAADVYEVY
EKQLRKNHALDFDDLIMSTIKLFQRVPEVLEHYQRKFQYIHVDEYQDTNRAQYVLVNMLA
DKYRNLCVVGDSDQSIYRWRGADITNILSFEEDYSDAEVILLEQNYRSTQRILQAANEVI
QNNTGRKPKNLWTENTEGKNIHYYQGDSEHTESYFVVGKMKEMLQEGRKPSDMAVLYRTN
AQSRVIEEALLKSNITYQIVGGTKFYDRKEIKDILAYLRLISNPDDDISLSRIINVPRRG
IGSTTLDKIVQYAAMHDLSVMEALGEVEQMGLSARFVNRLTEFRDQVMNWSKMQEYLSVT
ELTEEVLEKTGYKDELKKEKTIESQSRLENLDEFLSVTQEFEKQNEDKSLVSFLTDLALV
ADIDKMDDDEEDKKKDGVVLMTLHSAKGLEFPVVFLMGLEEGIFPHSRSIFDDDEMEEER
RLAYVGITRAEEELYLTNAKMRTLYGKTTMNPPSRFINEIPEELIETLNEEKETLPWMQT
SGGGAAPRAGAPQRAHRKTPVRKGGEGLDWSVGDKAKHGKWGVGTVVSTKGEGDSLELDI
AFPQPTGIKRLLAKFAPIEKA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
ttgcaacaaatcgttgaaaggctgctctcaggtctaaatcctgagcagaagagagccgtc
aaacatacagaaggaccattattgattatggcaggagcgggaagtggaaagacccgtgtg
cttacgcatcggattgcgtacctgctcatcgaaaaaggagtcgcgccgtggaacatcctt
gcgatcacctttacgaacaaagccgcacgagaaatgcagaacagggtggcatccataaca
ggaccggctgcggacaacatctggatttcgacgttccactcgatgtgcgtacggatttta
cgtagagattccgaccggatcggaattaaccggaacttcacgattctcgattcgacggat
cagctgtctgtcatcaaacaggcgttgaaggacttgaatctcgacacgaaaaagttcgat
gcgagaagcatcctcggaacgatcagctctgcgaagaacgaactgaaaacagcatcggat
ttcaaaaagaccgcggcaggcatgtatgaagaagtggctgcagacgtgtacgaggtgtac
gaaaaacagcttcgtaaaaaccatgcgctcgacttcgacgacctgattatgtcgacgatc
aagctgttccagcgtgtgccggaagtgctggagcattatcagcgcaaattccaatacatc
catgtcgatgagtaccaggatacgaaccgtgcccagtacgtgctcgtcaacatgcttgcg
gacaagtaccgcaacctttgcgtcgtcggtgactcggatcagtcaatctatcgctggcgt
ggagccgacattacgaacatcctttcatttgaagaggactattcggatgcggaagtcatt
ttgcttgagcaaaattaccgctcgacgcaacggattctacaagcggcgaacgaggtcatc
cagaacaatacaggccggaagccgaagaacctttggacggaaaatacagaaggtaagaat
atccactactatcaaggggatagtgaacatacagagagttatttcgtcgtcggtaaaatg
aaggagatgctccaggaaggacgcaagccttcagatatggcggtcctgtaccgaacgaat
gcccaatcccgtgtcattgaggaagcgcttctcaaatcgaacattacgtaccagatcgtc
ggaggcacaaagttctacgacagaaaagaaatcaaggacatcctcgcatacttgcgtctg
atttctaatccggatgacgacatcagcctaagccggatcatcaatgtaccgagacgtgga
attggatcaactacgctcgataaaattgtccaatacgcagcgatgcatgacctttccgtt
atggaagctttgggtgaagtcgagcagatgggtttgagcgcacgtttcgtgaaccgtctc
acggagttccgcgatcaagtgatgaattggtcaaaaatgcaggagtacctgtctgttacg
gaattgacagaagaggtgcttgagaagaccggttataaggatgagttgaaaaaagagaaa
acgattgaatcacaaagccgtctcgaaaacctggatgaattcctatcggttacacaggaa
ttcgaaaagcagaacgaagacaagagccttgtgtcgttcttgacggacctcgccctcgtt
gctgacatcgataagatggatgatgacgaagaggacaagaagaaggacggcgtcgtgctg
atgacgctccactctgcgaagggtcttgagttcccggtcgtctttttgatgggattagaa
gaaggcatctttccgcatagccgttccattttcgatgacgatgagatggaggaggaacgc
cggcttgcctacgtcgggatcacccgtgctgaggaagagctctatttgacgaacgcgaaa
atgcggacgttatacgggaaaacgacgatgaatccaccgtcccgttttatcaacgaaatt
ccggaagaactcatcgaaacgctgaacgaggaaaaggagacgcttccttggatgcagacg
tctggtggtggcgcagcgcctcgagctggagcaccacaacgtgcgcatcgtaaaacgcct
gtccgaaaaggcggcgaagggcttgattggagcgtcggtgataaagcgaagcacggcaaa
tggggtgtcggaacggttgtgagcacgaagggtgaaggcgattccctcgagctcgacatc
gcattcccacagccgacaggcatcaagcgcctgctcgcgaaattcgccccgattgagaag
gcataa
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