Pseudalkalibacillus nanhaiensis: V1497_03170
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Entry
V1497_03170 CDS
T11239
Name
(GenBank) Ig-like domain-containing protein
Organism
pnh Pseudalkalibacillus nanhaiensis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Big_13
CshA_repeat
Big_6
Big_1
Invasin_D3
CarbopepD_reg_2
CarboxypepD_reg
AglB_L1
Motif
Other DBs
NCBI-ProteinID:
XNY63700
LinkDB
All DBs
Position
606133..614433
Genome browser
AA seq
2766 aa
AA seq
DB search
MSKKRLATITKAGIVSSLLITPYNNIGNAAEHSGSPVVNWESVSFVPYKKSDGTLLFDPA
NEPGISPDEVDFVSGYSKGSGEMPSFYVGSDGSHMFFRMRLLESPYDRKGGFLSSVWFVQ
IAENGVHKATVGINGKSPHEDYIYVSNEKGTVVNKVNSTDGSGNNVPGTRIVEAENGQFF
LDFQVPISKVNEVAPSITANSNVQFFFGTSKAANLSVINKDYMGPNDGGSFEDSASVTLS
PELSFVIPSVEITSPAGFDTNTLTFTGTTTKAADGSTVEMTINGQTYETTVVNNTWSYTL
PEPLNDGSYTLTVKVKNEHNNIATTKQGIQVGNPISIDGGSTIQVSSFPTTISGTFSNEN
GGSKKIELFIKDEAGNVLHNIRNIQVNSTTQKWSKDVSFSLGKGTYTIEAVEDVKNNAGL
PRAAQTVIIDNQIDVSISSPSNNTSSEDPMPTITGSADPHAKVVVFIDEVFYREVTADST
GNWTLEIGKALSPGTHTFKARATDEIGNTKETSSINYTVTSLDISIANGSNVQLNDNIPT
IRGRTTAPDGSVVDVQIGTRETMKATVKNGRWSADVLNPLDDGPHTITANVSSGGMTATA
TQQLTIDSSTFVTITTPENQKVTENKREPIQGTAEPNATIGINLNDGEIVRTAFADGTGN
WSFVPSEDLEVGQYDARITASDVNGNVATESTSFSVNAPGNQLPSTQNYTLTTVKNELLS
GTVEGTDPDNDPLSFNLGTEAANGTVNVNVDGTWTYTPDTDYTGSDQFTVKVSDGKGGVA
YSTVVIEVTEPPNQPPTTVDYEIETLMNTPVSGIISAEDPDGDVLTYRLKTTATKGTATV
TSEGNWEYTPNEGYVGPDHFVVEIDDGNGGITTSTVSITIKEPPNQLPEVGNYNESTVKN
TPVSGKVSGTDADGDTLTYSMKTSPNHGSVEFQSDGNWTYTPGADYVGPDSFTVEVSDGK
ASVISEISLNVIEPENKLPIVDNYNVKTEQNQAVDGAVEATDPDGDPLTYTIGEVPAHGT
ATVNETGNWTYTPATDYIGTDQFTIEVADGNGGTVTSTISVNVTEPINQLPVVDNASVET
EQNQAVDGVVEATDPDGDPLTYAIGEVPAHGTATVNESGHWTYTPNDDYIGTDYFSVEVS
DGKGGIVTSTISVNVMEPVNQLPVVDNASVETEQNKAVAGLVKASDPNGDPLTYAIGEVP
VHGTATVNDSGNWTYTPDADYIGMDQFSVKVSDGKGGTVASTISVNVTEPVNHLPTVSNY
SEETEMNQSVGGKVIGNDPDNDALSYRMKEAPTNGTATVNADGSWTYTPATDFTGADQFS
VEVSDGRGGTVTSTISINVLEPVNHIPTVDNYNEKTEQNTMVSGRITGADPDGDSLSYMK
NSDPSNGTATVDSDGNWSYTPHTDFTGMDQFTVQVSDGRGGTAISTVSINVAKSNQLPVA
DNYNEQIEQNTSISGKVVATDPDGDSLIYSINRAASHGTAVVKADGTWTYTPNTGYVGTD
QFTVKVSDEKGGEVISTISINVLEPVNQLPTVENENVQTEHNQPVEGKVIGHDEDGDTLT
YSKESEPAHGTAVLYADGTWSYTPETGYVGTDQFTVKVTDGKGGEAISTISINVLEPVNQ
LPTVDNYNVKTDHNMPVEGKVIGHDEDGDTLTYSKESEPTHGTAILNADGTWSYTPNTGY
VGTDQFTVNVSDGKGGEAISTISINVLEPVNELPVVDNYNIQTELNRSVEGVVKGTDPDG
DPIFYKKGSDSVHGMVEVGEDGSWIYTPNTGYIGTDSFTVELSDGRGGLATSTISINVME
PVNQLPAVDNYNVETEQNVAVEGRVMGEDPDGDTVTYTIGTNPAHGKVSLNTDGTWSYTP
EFDYIGYDSFTVEVADGKGGVVISTISINVKELVNHAPTVGNYTETTEEDTPLTGKVTGE
DPDDDTLTYSMDHPPVHGTVEVKEDGTWTYTPEADYVGVDHFRVLVTDEQGATAVSTVTV
EITEMVTNINIDGGDERKTVDRTPLIVGEADAQEFSDVSVQIVDESGNVIEEGKTSLVDG
RWSYQVTQVLKPGTFKIVAILKGKNQEKLNRDEQILEIEAAELNLELVSSPATIVGDGKT
RAILTAVIKDSNGKPIKGEKVSFSTEAGTLASSESYTNEKGEAIVELISPDMSGTIEGQR
KVIKASVSNPDKNLFGESEIVVHFVPASVNGVIMDSNLNEPIPGALIEIEEDFNQDGIID
FSIQTYTDENGAYDIAVPYANWDYTLNVTATSTVEGHTFPIEYSMTAKVGEISGVGEKIK
SQKTVSGQLYIFDQVTNLPEGISSFANGAKVKPVVLNDGSGNLKVDVDDSGKYTITGGEA
GQTYDILLNVEVTDKNGASHLLVGKKISVKVPEDGVSEVQTTLIDPYGIIIDDETGLPIE
GVNVQLYWADTELNRNKGRTPHTLVNLPILEGFAPNDNRVPQFSTAGGAYAWMVFPDGDY
YIVAEKDGYVTYDSRTEGRDREAGPGEDSYIREGIIHVGQTIVEYDFSMTAINDSEEPAN
QAPTIRDYQFKVKQDTVLSEKVTGNDLDGDALTYRLLTLPNNGTITVQPDGSFTYTPLPG
FKGNDQFTIEVSDEHGETARSTINIIVEENATDDSTTNFLVETFENRSISGNLKDLNVVN
PKDIQVKSPDNGKVDVDLNNLNWVYTPDKDFTGKDRFTILYHDEAGVLYTIYVDVVVHES
NVPIGHDPGEDNSNDPAPKVGEDLTELPKTGSLLDRNLLVSLASLLGVSGLLMRRFGRRN
EDEETR
NT seq
8301 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaaagattggcaacaatcacgaaagcaggaattgtctcaagcttactgatt
accccttacaacaatatcggaaatgctgcagaacatagcggatctccagttgtaaattgg
gaatcagtttcatttgtcccttataaaaagagtgatgggacattgctattcgatcctgca
aatgaacctggaatcagtccagatgaagtggattttgtaagtggttattcaaagggatct
ggagagatgccttctttctatgtaggcagtgatggatctcatatgttctttcgaatgaga
ttacttgaaagcccttatgatcgaaaaggtggattcctatcttctgtttggtttgtccaa
attgctgaaaacggtgtccataaagcaactgttggtattaatgggaagtcaccgcatgag
gattatatttatgtatcaaatgagaaagggactgttgtaaataaagtgaattcgacagat
ggttcaggaaacaatgtgccaggcacacggattgtcgaagctgagaacggtcaattcttt
ttggattttcaagtgccaatcagcaaagtgaatgaggtggcaccatccattacggcaaat
tcgaatgtccagtttttctttggaacgtctaaggcagctaacctatctgttattaacaag
gattatatgggacctaatgatggtggatccttcgaggattctgcaagcgtcactttaagt
ccagaattatcttttgtcataccttctgtagaaattacaagtcctgctggttttgatacg
aatacgttaacgtttactggtacaacaacaaaagcagctgacggaagtacagttgaaatg
acgatcaatggtcaaacgtatgaaacgacagttgtgaacaacacgtggagctatactttg
cctgaaccgttgaatgacgggagctatacgctgacggttaaggtaaagaatgaacacaat
aatattgcgacgaccaagcaaggaatccaggtcggtaatccgatttccattgacggggga
tctacgattcaagtgagttcattcccaacaacaatctctgggacgttttcaaatgaaaat
ggcggcagtaagaaaatcgaattgttcatcaaagacgaggctgggaacgtacttcataat
attaggaatatccaggtgaattctacgactcagaagtggagtaaggatgtttcttttagt
ttgggaaaaggcacttatacgattgaagccgtagaagatgttaagaataatgccggtttg
ccgagagcagcccaaacagtcataatcgataatcaaatcgatgtatcgatctcaagtcca
agtaacaatacgagctcagaagatccaatgccgacgataacgggtagcgctgacccccat
gcaaaagtggtcgtttttattgatgaggttttttatcgtgaagtaactgcggattcaact
gggaattggacgttggaaatagggaaggctttatcacctggtacccacacgttcaaagcg
agagcaacagatgaaattggaaatacaaaagaaacatcatcaataaattacaccgtaacc
tctttagatatcagcatagccaatgggagtaacgttcaattgaatgataatatcccaacg
attcgaggccgtacgactgcaccagatgggagcgttgtggatgttcaaatcggtacgcga
gagaccatgaaagccactgttaaaaatggcagatggtcagccgacgtactgaatccgtta
gacgatgggccacatacgattactgcgaatgtgtccagtggaggaatgacagcaacagct
actcaacaactgacgattgattcctcaaccttcgtcaccattaccacaccggaaaaccaa
aaggtgacggagaataaacgagaaccgatccaaggtacagcagaaccgaatgccaccatc
gggatcaatctaaatgatggtgagattgtacggacagcatttgcagatggaactggaaat
tggtcatttgtgccttccgaagatttggaagtggggcaatacgatgcgaggattaccgct
tcagacgtaaatgggaatgttgcgacagaatcgacttctttttccgtaaatgcccctgga
aaccaactcccgtcaacacaaaactacaccctgacaacggttaaaaatgagttgcttagc
ggtacggttgaaggaacggatccagataatgatccactatcctttaaccttggaacagag
gcagccaacgggacagtcaatgtaaacgtagacggaacatggacatatacaccagacaca
gactatacaggaagcgatcaatttacggtaaaagtatcagatggtaagggtggtgtcgct
tattccacggttgtgattgaggtgacagaaccaccgaatcaaccacctacgaccgtagac
tatgagatagagactttaatgaatacgcctgtaagcggaataatctctgctgaggatcca
gatggagatgtactcacatatagattgaaaacaactgcaacgaaagggacagctaccgtc
acttctgaagggaattgggaatatacccctaatgaaggttatgtagggcccgatcatttt
gtggtagagattgatgatggaaacggtggaataaccacttctactgtctcaattacaatc
aaagaaccgcctaatcagctccctgaagtcggtaattacaatgaatccactgttaaaaat
acgcctgtaagtggaaaagtgtcgggtacggatgctgatggggacacgttgacatatagt
atgaaaactagtccaaatcatggaagtgtagaatttcaatcagatggaaattggacatac
acacctggagcagattatgtcggtccagacagcttcacggtggaggtttcagacggaaag
gctagtgtcatttcagaaatatccttaaatgtgatagaacctgaaaataaactacctatc
gtagacaattacaatgttaaaactgagcaaaaccaagctgtggatggggctgtggaagca
accgatccagatggagatccattaacgtacacgatcggtgaagtaccagcacatgggacg
gcgaccgttaatgaaacaggaaactggacgtacactccagctaccgattacatcggaaca
gaccagttcacaatcgaggtagctgatggaaatggtggtacagttacttcgaccatttcc
gtgaatgtgacggaaccgatcaatcagttgcctgtagttgacaatgccagtgtggaaacc
gagcaaaaccaagctgtggatggtgttgtggaagcaaccgatccagatggagatccatta
acgtacgcgatcggtgaagttccagcacatgggactgctaccgtaaacgaatccggacac
tggacctacactccaaatgacgattatatcggtacagactatttttctgtagaggtatca
gatggaaaaggtggtatagttacctcaaccatttctgtgaatgtaatggaaccagtcaat
cagttgcctgttgtcgacaatgccagtgtagaaacggaacaaaataaagctgtcgcaggt
ctcgttaaagcttcggatccaaatggcgatccattaacgtacgcgatcggtgaagttccc
gttcatggaacggctaccgtaaacgactccggaaactggacgtacactccagatgccgac
tatatcggtatggaccagttttcagtaaaggtatcagatgggaaaggtgggacagtagct
tcaaccatttctgttaatgtgacggaaccggtcaatcaccttccaacagtgagtaattac
agtgaagaaactgaaatgaaccaatctgttggtgggaaagtaatcggaaatgatccggat
aacgatgcgctttcctacagaatgaaggaagcaccaacaaacgggacagctactgtaaat
gcagatgggagctggacgtatacaccagcgacggattttactggagcagatcaattttca
gtagaggtatcggatggtcgaggcggtacagttacatccaccatatccatcaatgtcctt
gaaccagtgaaccatattccaacagtggacaactacaatgaaaagaccgaacagaatacg
atggttagtggcagaataactggagcggatccggacggggactcattaagttatatgaaa
aatagtgatccgagtaatggaactgccacagtagattcggatggaaactggtcatataca
ccgcatacagatttcactggtatggatcagttcactgtacaagtgtcggatggtcgaggt
ggtacagccatttcaactgtatccatcaatgtggcgaagtccaatcaattacctgtagcg
gacaactacaatgaacagatcgaacaaaatacttccatcagtggaaaagtagttgcaaca
gatccggatggggatagtctgatttacagcataaatcgtgcagcaagtcatggtacagca
gtcgttaaggctgatggaacttggacctatacacctaacacaggttatgttggaacagat
caattcactgtaaaagtttccgatgaaaaaggcggagaagtaatctcgacaatctccatc
aatgtacttgagccagtgaaccagttaccgacagtcgaaaacgaaaatgtccaaacggaa
cacaatcagcctgtagaggggaaagtaatcggccatgatgaagatggcgacacactgacg
tatagcaaagaaagtgaacctgctcacgggacagccgtcttgtatgcagatggaacttgg
agctatacaccagagacaggatacgttggaacagatcagttcactgtaaaagtcaccgat
ggaaaaggcggggaagctatttccacaatctccatcaatgttctcgagccagtgaaccaa
ttaccgactgtagacaactataatgtgaaaacagaccataatatgcctgtagaggggaaa
gtaatcggccatgatgaagatggcgacacactaacgtatagcaaagaaagtgaacctact
cacgggacagccatcttgaatgcagatggaacatggtcttatacacctaacactggttac
gtagggacggaccaattcacagtaaacgtttccgacggaaaaggcggggaagccatttcc
acaatttcgatcaacgttctggagccagtgaatgagctgccagtagtagataactataat
atacagacggaactaaatagatctgttgagggtgttgtaaaaggaacggacccagatgga
gatccaatattctataaaaaaggaagcgattctgtacatggaatggttgaagtcggtgaa
gacggcagttggatttatacaccgaataccggatacatcggtacagatagctttacagta
gagctatcagatggtcgcgggggcttggccacatcaacgatctcgataaacgtgatggaa
cctgtcaaccagcttcctgctgttgacaactacaatgtggaaaccgagcaaaacgtagcg
gttgaaggccgggtaatgggagaagatccggatggggacacagtaacctacacgattggg
acaaatcctgctcatggaaaggtttctttgaacacagatggaacgtggtcgtatacccca
gaatttgattatatcggctatgacagctttactgttgaagttgcggatggaaaaggcggc
gttgtgatctcaacaatctccatcaacgtgaaagaactggtaaaccatgctccgacggta
ggaaactataccgagacgactgaagaagatacgccgcttacaggtaaggttacaggtgaa
gatccagatgacgatacgttgacatatagtatggatcatccaccagtccacgggactgtc
gaagtgaaagaagacggaacatggacgtatacacctgaagccgactatgtcggtgtcgat
catttccgcgtgcttgttacggatgaacaaggtgccacagctgtatcaacggtcacagta
gaaattacagagatggtcaccaacatcaacattgatggcggggatgagcgtaaaacagtt
gaccgtacaccattaattgtaggagaagcggatgcccaggagttctcagatgtatctgta
caaattgtcgatgaaagtggaaatgtcattgaagaaggtaagacaagccttgtggatggc
cgttggagttatcaggtcacgcaagtattgaaacctggcacatttaaaattgttgcaata
ttaaaggggaagaatcaagaaaagctgaatcgtgatgaacaaattcttgaaatcgaagct
gcggaactgaacctcgaacttgtttcaagtcctgctactattgtcggtgacggaaagaca
agggcgatcttgacagcggtcattaaggactcgaatggaaagccgatcaagggagaaaag
gtttcattctctacggaagctggaacacttgcttccagtgagtcctatacgaacgagaaa
ggtgaagcaattgtagaacttatttcaccggatatgagcggaacaatcgaaggacaacgg
aaagtgatcaaggcttcggtttccaacccagataagaaccttttcggagaaagtgaaatt
gtggtccatttcgtccctgcatctgtgaacggagtcattatggattccaatttgaatgaa
ccgataccaggcgcgttgattgaaattgaagaagatttcaatcaagatgggatcattgat
ttttccattcaaacctataccgatgaaaatggagcgtatgatattgcagtaccatatgca
aattgggattatacgttgaacgtaacagctacgtccacagtggaaggtcacaccttcccg
attgaatatagcatgacggctaaagtgggcgaaatctcaggagtcggcgaaaagatcaaa
tctcaaaaaacagtatccggccaattgtatattttcgatcaggttaccaacttaccagaa
ggaatcagctcgtttgcaaatggagcgaaagtgaagcctgttgtactgaatgatggttct
ggcaacttgaaagtggatgtagacgattcaggtaaatatacgattactggcggagaagca
ggccaaacctacgatatccttttgaacgtagaagtaacggataagaatggagcttcccac
ttacttgtagggaaaaaaatcagtgtcaaggttccggaagatggcgtgtcagaagttcaa
acaacattgattgatccatatgggatcatcatcgatgatgaaacaggcttaccgattgaa
ggcgtcaacgtacagttatactgggctgatacagaactgaacaggaataaagggagaaca
cctcataccttagtaaatttgccgattcttgagggctttgcaccaaatgataatcgggtt
cctcaattttctactgctggaggagcttatgcatggatggtctttccagatggcgattat
tacattgttgctgagaaagacggctatgtgacctatgacagccgcactgaaggcagagac
cgggaagcggggcctggtgaagacagctatatccgagagggaatcattcatgtgggacaa
acgatcgtcgaatatgatttctcgatgacagcaatcaatgattcagaggagccggctaat
caggcacctacgattcgggattatcagttcaaggtgaaacaagataccgtattgagcgag
aaagtgactggaaacgacttggatggtgacgcccttacttacagattgcttactctaccg
aacaacggtacgataacggttcaaccagatggatcgttcacttacacaccattgccaggt
tttaaaggtaatgatcagtttacgattgaagtatcagatgaacatggagagacagctcgt
tccacaatcaatatcatcgttgaggaaaatgccacagatgacagtacgaccaatttcttg
gtcgaaacgtttgaaaaccgttccatcagtggaaatctaaaagacttgaatgttgtgaat
ccgaaggatattcaagtgaagtctccggataacgggaaggtagatgtcgacctgaacaac
ctgaactgggtctatacaccggataaggactttacaggtaaggatcgctttacaatcctg
tatcatgacgaagcgggtgtgctttataccatttatgtagatgttgtcgttcatgaaagc
aatgtacctatcggccatgacccaggtgaagacaattcgaacgatccggctccaaaggta
ggagaggatttgacagagttaccgaaaacggggtctcttctcgatcgtaatctattagta
agcctggctagcctgttgggagtttcaggactattaatgagaagatttggtcgacgaaat
gaggatgaagaaacaaggtaa
DBGET
integrated database retrieval system
