Pseudalkalibacillus nanhaiensis: V1497_03480
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Entry
V1497_03480 CDS
T11239
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
pnh Pseudalkalibacillus nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pnh03019
]
V1497_03480 (yhaM)
Messenger RNA biogenesis [BR:
pnh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
V1497_03480 (yhaM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
XNY63757
LinkDB
All DBs
Position
681594..682562
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AA seq
322 aa
AA seq
DB search
MKRGIQQYDVGDVFDDYLLIKSASKGMTSTGKPFMTLILQDHTGDIEAKLWDSSPEDERL
YLPEHIVKVTGDITSYRGKSQLKVKQIRLTNDQDGVNVHDFVETAPIPQEEMIEVITQAM
FEMENPNIQRITRHLVKKHQRAFLDYPAATKNHHDFVSGLAYHVVSMLRLAKSIAQLYPT
LDKDLLYAGVILHDLGKTRELSGPVAPSYTIEGNLLGHITMMVEEIKEAAQELGIEGEEV
VILQHMVLSHHSKAEWGSPKPPLVREAEILHYIDNIDAKMNMMDRALSKVAPGEYTERVF
ALDNRSFYKPLFEKSESVQSNS
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaggaatccagcaatatgatgtcggtgatgtgtttgatgattatctattgatc
aagtcggcttccaagggaatgacgagtacaggcaaacccttcatgacactcatccttcag
gatcatacaggagatatcgaagcgaagctgtgggactcttcaccagaagatgaaaggctc
tatctgccggaacacatcgttaaagtgacgggtgacatcacaagctacagaggaaaaagt
cagctgaaggtgaagcagatcaggcttaccaatgaccaagatggtgtgaacgtccatgat
tttgtcgaaacagcaccgattccccaagaagagatgattgaagtcatcactcaagcgatg
tttgaaatggaaaacccgaatatccaacgaattacaagacacttggtgaagaagcaccag
agggctttcttggattatccagctgcaacgaaaaatcatcatgactttgtttcgggactc
gcgtatcatgtcgtttccatgcttcgtttggcaaagtcgatcgctcaattatatccaact
cttgataaggacctcttgtatgcaggtgtgattttacacgatctcggaaaaacgagggaa
ttgtcgggtccggtagcaccgagctatacgattgaaggcaatctgctcggacacattacg
atgatggtcgaagaaattaaagaagccgctcaagaactcgggatcgaaggggaggaagtc
gtcatcctgcagcatatggtgttgagccatcattcgaaagcagaatggggaagcccgaag
ccaccacttgtaagggaagctgaaatcctccattacatcgacaatatcgatgcgaaaatg
aacatgatggacagggccttaagtaaagtagcaccgggtgagtatacggaacgcgttttc
gcattggacaaccgttcattctacaagccgctatttgaaaagagcgaatcagtccaatcg
aattcataa
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