Pseudalkalibacillus nanhaiensis: V1497_03730
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Entry
V1497_03730 CDS
T11239
Name
(GenBank) HelD family protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh03420
Nucleotide excision repair
pnh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V1497_03730
03430 Mismatch repair
V1497_03730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_03730
Enzymes [BR:
pnh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1497_03730
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V1497_03730
MMR (mismatch excision repair)
Other MMR factors
V1497_03730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNY64922
LinkDB
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Position
727146..729254
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AA seq
702 aa
AA seq
DB search
MQSAFEEEKQQLKKIAAEIEGQLERLEKIPRYYGDDITEQAIDDSREQTRSNLRIAKDEP
FFGRLDFHEDGKGSPDELYIGKVGISKDLTNDVMVIDWRAPVASLFYSYSGGEEDIYYAS
PDGIVEGDIHLKRNVVIRNQKLQRVVDTYVKGSDETAGTDEFLLYRLGDKKDNRLRDIVS
TIQAEQNHIIRAEKNRPLIIQGVAGSGKTTVALHRLAYLLYHYRDQLSASQMVIFAPNRM
FLDYISNVLPELGVGGIQQTTFTEWAKEILGTKMTVLEEDHDLDAYFSNGPEGINGELEP
GKIKGALAYKDAIDEAIQRFENDVVPNQDLILWEDCKLSAASIRSWDKGQMHFPISVRRN
RMMKKLKKWVKERVDETLPHERKNRKKQADQKLKQFMKAWPDHNASTFYKELFRKTEIPK
FAEGIQEYLPDDVVSDTRKFLSKKKVRAEDLPALLWIHQRLVGKDKHFTYQHIVIDEAQD
FSPFHIAVLKSNALEDSFTILGDISQGIHSYKGIDSWEEFENVFEERKSKYVQLEKSYRS
TYEIIEYANRILETMKHTGGLAKPVFRSGEPVKEVSYSGQDRIEKIVNVLEKVMDSEFES
VALVGRTAEDCRRLHDELVKRGIDAKLITADQSEYEGGLSVIPVYLTKGLEFDAVLMIDA
DPTRYRLNDHDAKLMYVGCTRALHQLWVMYEDTLTPLVHKAE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
attcaaagtgcctttgaagaggagaagcagcaactcaaaaaaatcgctgcggaaattgaa
ggtcagctggaaaggttagaaaaaattcctcgctactatggggacgatattacggaacaa
gcgattgatgatagcagggaacaaacacggagcaatttgaggattgcaaaggatgagcca
ttttttgggcgattggactttcatgaagacggtaaggggtcacctgatgaactttatatc
ggtaaagtcggtatctccaaggacttgaccaatgatgtgatggtgattgactggcgtgca
cctgttgcaagcttattttattcttacagtggtggtgaagaagacatttattatgcttcc
cctgatggtatagtcgagggcgatattcatctgaaacggaatgtggtcatcaggaatcaa
aagctccaacgggttgtggatacgtatgtgaagggaagcgatgaaactgcgggtaccgac
gaatttcttctctacaggctcggtgataagaaagacaatcggttaagggatatcgtctcg
acaatccaagcggagcagaaccacatcattcgtgcagaaaaaaataggccgctcatcatc
caaggtgttgcggggtcagggaaaacgactgtcgccctccaccgactggcctatctcctt
tatcactatcgtgatcaattgagtgcgagtcaaatggttatttttgcgccgaatcggatg
tttttggattatatctcaaatgttctgccagaactgggagtcggcggcatccaacagaca
acgttcacggaatgggcgaaagaaatccttggtacaaagatgaccgttctggaagaagat
catgacttggatgcttatttctctaatggacctgaagggatcaatggtgagctagaacct
ggaaaaataaaaggtgctctagcttataaagatgcgatagatgaggcgatccagcgcttt
gagaatgatgttgttccaaatcaggaccttattttgtgggaggattgtaagttaagtgca
gcttcaattagaagctgggataagggacagatgcattttccgatctccgtccgacgaaac
cggatgatgaagaagttgaaaaaatgggtgaaggaacgggttgatgaaacgttaccccat
gagcggaagaatcggaaaaaacaagccgatcagaagctgaagcagtttatgaaggcctgg
cctgatcataatgcgtccaccttttataaagaattgttccggaagacggaaattccaaag
tttgcagagggaattcaggaatatctgcctgatgatgtggtttctgatacaagaaaattc
ttgagcaaaaagaaggtgagagcggaagatttaccggcattgttgtggatccatcagagg
cttgtaggaaaggataagcacttcacctatcagcatattgtcatcgatgaagcccaggat
ttctcaccattccatattgctgtgttgaaatcaaatgcactggaggactcctttacgatc
ttaggcgatatctcccaagggatccattcctataaaggaatcgacagctgggaggaattc
gaaaacgtgtttgaagagcggaaaagcaagtacgtccagttggagaaaagctatcgatcc
acgtatgaaatcattgaatatgcgaaccggatccttgaaacgatgaagcacacaggcggt
cttgcaaagcctgttttcagaagtggagagccagtaaaggaagtcagctacagcggacag
gaccgcatagaaaagatcgtgaatgtgttagagaaagtgatggattcagagtttgagagt
gtcgctctagtcggaaggacagcggaggattgcagaagacttcatgacgaattagtcaaa
agaggaattgacgccaagcttataacagcggatcaatccgagtacgaaggcggattatcc
gtcattcctgtgtatctgacgaagggtcttgaattcgatgcggtattgatgattgatgca
gatccaacccgttaccggttgaacgatcacgatgccaaactcatgtatgtcggatgcaca
cgtgcccttcaccagctatgggtcatgtatgaagatacgctaaccccgcttgttcataaa
gctgaataa
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