Pseudalkalibacillus nanhaiensis: V1497_04260
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Entry
V1497_04260 CDS
T11239
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnh03016
]
V1497_04260 (rnz)
Enzymes [BR:
pnh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
V1497_04260 (rnz)
Transfer RNA biogenesis [BR:
pnh03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
V1497_04260 (rnz)
Prokaryotic type
V1497_04260 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Orthopox_A5L
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
XNY64926
LinkDB
All DBs
Position
complement(827930..828868)
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AA seq
312 aa
AA seq
DB search
MEFHFLGTGAGIPSKGRNVSSMALRFMTNRQGEIWLFDCGEATQHQILHTTIKLWQVRKI
FITHMHGDHIYGLPGVLGSRSFQGAEDTLTVYGPKGIKEFITVALETSRTYLKYPLEIIE
IEDGFHELDEGYQIEAALLEHVIPSYGFRITEPEQPGRLQVERLKEIGVSPGPVYSRLKA
GETVTLEDGRTICGEDFTTPPQPGRVVTICGDTRPTKKTIELARDADLLVHEATFAEGMD
ERAIEYFHSTTNQAAELAKQAGAKRLILTHISSRYYDKADELTESAVNIFPNTELAEDFA
IFQLTKKNTKKV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggagtttcattttctaggtacaggtgcgggaataccgtcaaagggaagaaacgtttca
tcaatggcactccgtttcatgacgaaccgtcaaggggaaatttggttatttgattgcggt
gaagcgacccagcatcaaatcttacatactacgatcaagctatggcaggtcaggaaaata
ttcatcacacacatgcatggcgatcatatctacggtttgccaggggtacttggcagccga
tccttccagggtgctgaagatactttaacagtatatggaccaaaaggaatcaaagaattc
attactgttgcgcttgagacgagcaggacctacttgaaatatccacttgaaatcattgag
atcgaggatggatttcatgagctggacgaaggctatcaaattgaagctgctttattggag
catgtcatcccctcatacggtttcaggattacagagcctgaacaaccgggtcggcttcaa
gtggagcgattgaaggaaatcggcgtctcaccaggtccagtttacagtagactgaaggct
ggagaaaccgtcacgcttgaagatggtcgaaccatttgtggagaagatttcaccactcca
cctcaacctggtcgggtcgtgacgatttgcggagatacccgtcctacaaaaaaaactatc
gaacttgcaagggatgccgacctactcgtccacgaagccacatttgcagagggaatggat
gagcgggcaatcgaatattttcattctacaacgaaccaagcggcagagcttgcgaaacaa
gccggagcaaaacggttgattctcactcatatcagctcccgctattacgataaagcagat
gaattaacagaaagtgccgtgaacatatttccgaacacggaacttgctgaggatttcgcc
atttttcaattgacaaagaagaacacgaaaaaggtgtga
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