Pseudalkalibacillus nanhaiensis: V1497_06590
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Entry
V1497_06590 CDS
T11239
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pnh Pseudalkalibacillus nanhaiensis
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_06590 (addB)
Enzymes [BR:
pnh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V1497_06590 (addB)
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
V1497_06590 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
Anti-LPS-SCYG
Motif
Other DBs
NCBI-ProteinID:
XNY64352
LinkDB
All DBs
Position
1264851..1268348
Genome browser
AA seq
1165 aa
AA seq
DB search
MSVRFMVGRSGTGKTTVCLDEIRQELHNAPTGKPIVMLVPDQMTFQMEYELAKTPGLGGM
IRAQVFSFSRLALKVLQETGGLTRYHVNSTGMNMLLRKVVEKLKNELVIFHKSSEQNGFY
ELLEEMIKEFKRYCLGAGDLEQLENKLLDESDDRSLLKDKLHDLHIIYHELDKILVNQYV
DSEDYLRLLEEKMPSSTFFEDCDVWIDGFHSYTPQEIGVIRALMKKADRMTLTLTMDEPT
EHQPSDLDLFRMTHTTYHKIKEIAMEEGVEIEPLHVLEHTYRFDHSPSIRHLENYYHERP
VIPYYGESSVQISGAVNRRAEVEGVARDIQELVHKSGYRYRDIAILVRDASTYSDLLETL
FEDYEIPYFLDQKRSMLHHPLIECIRSSLDVVLQNWRYDAVFRCVKTDLLFDDEKWNTKE
LRERVDQLENHVLAHGIHGKKRWTSRENWVYRKFSSLDAAIGTQTDAELEKEQLINRARQ
MIADPLARLERDLREAKNGKELCEALYLYLEYLQVPRKLESWRLKAEENGELSLAREHDQ
VWKAVVDLMEQMVEIVGDEPLSLELFNKMLDTGLESMRFALVPPSIDQVLIGSLDRSRFY
DVKCSFIIGVNDGVLPAKPSEDGIFSEDDREALKTLGVEMAPTARENLLDENFLIYMALS
SASDYLYISYPLADEEGKGLVPSILINQLKELFPEQNERLLMQEPNESEEAIERFIARPG
RTLSFLTNQLRHWQKGYPISAEWWHVYNWFVDDTGWSKTAERTIHSLFYENKAQKLTGKT
SKELYGDQLKTSVSRMERHQSCPFSHFASYGLKLEERQLFRLEAPDIGQLFHAALKEMAD
ILKQRRMDWRELSASDCYRIAGEVVEKLAPRLQSQILLSSNRYQYIKRKLKNVVGRASYA
LSEQAKASGFSPVGLELGFGMNERIPALKYKLQDGTTMEVVGRIDRVDAATKDDDLLLRV
IDYKSSQRGLNLSEVYYGIALQMLTYLDVVLTYSDTWLGKSAEPAGVLYFHVHDPVHSSK
KLLTLEEIEKELFKKFKMKGYVLDDEEVVKMMDKTIDGFSEIIPVATKKDGSFRKGSSTM
EKEQFDDVRSFIRSKIGSIGSDIMNGNIDISPYEMQKKTPCTYCSFRSVCQFDHSLEEND
YRILKDMKEDELFNLFKKKGGDGNA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtccgattcatggtcggaagatccggtacaggtaagactacggtctgtcttgat
gaaatcagacaagaactacataacgctccaacgggcaaacccattgttatgctcgtgcct
gatcaaatgacctttcaaatggaatacgagctagcgaaaacacctggacttggcggaatg
attcgtgcacaggtgtttagtttttcccgcctcgcattgaaagtgttgcaagagaccgga
gggttgacccggtatcatgtaaattcaaccgggatgaacatgttgctcaggaaagttgtt
gaaaagctgaaaaatgaactggtcatttttcataaatcatctgagcagaatggattttat
gaattgcttgaagagatgatcaaggaattcaagaggtattgtttaggtgctggcgatctt
gaacaattggaaaataaattgcttgatgaatccgatgacagaagtctattgaaggacaag
ctgcacgatttacatatcatttatcatgagttggacaagatcctagtcaaccaatatgtc
gattccgaggactatcttcgtctgctggaagaaaagatgccatcttccacattcttcgag
gattgtgacgtatggatcgatggcttccatagttatacgccacaagaaatcggtgtcata
cgggcgctgatgaaaaaggcggatcgtatgacgcttacgctcacgatggacgagccaacc
gaacatcaaccatctgacttggatttattcaggatgacacacaccacctatcataaaata
aaagaaattgcgatggaggaaggagtggaaatagaaccgctgcatgtcctcgaacataca
tatcgatttgaccactccccatccatcaggcatttggaaaactattatcatgaacgtccg
gtcattccttactatggtgaatcatctgttcaaataagcggtgctgtcaatcggcgtgct
gaagttgaaggggtagcaagggacatacaagagctcgtacataaatcaggctaccgctat
cgggacattgcaatactcgttcgcgatgcttcaacctattccgatttgttggagacgcta
ttcgaagattacgagattccttatttccttgaccaaaagcgatccatgcttcaccaccct
ttaattgaatgcatccgttcaagtcttgacgtcgtcctgcaaaattggcgctacgatgca
gtctttcgttgtgtgaaaacggatttgttatttgatgatgagaaatggaatacgaaagaa
cttagggaacgcgtggatcagcttgaaaatcatgtactggctcatggaatccatggaaag
aagcgatggacgagtcgtgaaaactgggtttatcggaaattcagttccctcgatgctgcc
ataggaacacaaacagatgccgagcttgaaaaagaacaattgattaatcgtgcacgacaa
atgattgcggatcctttagcccgattggaacgggacctgagggaggcgaaaaatggaaag
gagctatgcgaagccctttacctctatttggaatacctgcaagttcctcgtaagctggaa
agctggcgcttgaaggcagaagaaaatggtgaattgagcttggcgagagagcatgatcag
gtttggaaggcagtcgttgacttgatggaacagatggtcgaaatcgtaggtgatgaaccg
ttaagcctcgagttattcaataagatgctggatacaggcctggagtcgatgcgcttcgca
ctcgtcccgccatccattgatcaggtccttatcggaagtcttgatcgatctcggttttat
gatgtcaaatgcagtttcatcattggcgtgaatgatggtgttttacctgcgaagccatcc
gaggatggcatattctctgaggatgatcgtgaggcgttgaaaacactcggggtggaaatg
gcaccgacagcaagggaaaatctactcgatgaaaatttcttgatttacatggctctctct
agtgcatcggattacttgtacatttcgtatccattagctgacgaagaagggaaggggctt
gtcccatccattcttatcaatcaattgaaagagttgtttccagagcagaatgaaagactg
ctcatgcaggaaccgaatgaaagtgaggaagcgattgaacgtttcatcgcacgtcctgga
agaaccttatcgttcttgacgaaccagttgcgccattggcagaaagggtatccaatctca
gcggaatggtggcatgtatacaattggttcgtggatgacaccggctggtcgaaaacagca
gaacggacaatacacagtctcttttatgaaaacaaggcacaaaagcttactggtaaaacg
agtaaggaattgtacggagaccagttgaaaacgagtgtatccaggatggaaaggcatcag
tcctgtccattttcccattttgcaagctacggactcaaactggaagaaagacaattgttc
cgccttgaagcaccagacatcggacagctatttcatgctgcattgaaagaaatggcggat
atcttgaagcaaagaagaatggactggagggagttgtctgcatccgactgctatcggatt
gcaggggaagtggttgaaaagctcgctccacgattacaaagccaaatccttctcagttcc
aaccgctatcagtatattaagcgaaaactgaaaaatgtcgtagggcgagcctcttatgct
cttagtgaacaagctaaagcgagtgggttctctcctgtcgggcttgaacttggattcggc
atgaatgaacgtatccctgctttgaagtacaagctgcaggatggtacgacgatggaagtg
gttggacggattgaccgagtcgatgccgcaacgaaagatgatgacctgcttctaagagtg
attgattataaatcgagtcagagagggttgaacctgtctgaggtctattatggaatcgct
ttgcagatgcttacctatctggatgtcgttttgacttactcagacacgtggttagggaaa
tctgccgaaccagcaggtgtcctgtacttccacgttcatgatcctgtccattcatccaaa
aaacttttgactcttgaagagattgaaaaagaacttttcaagaaattcaaaatgaagggg
tacgttctggatgatgaggaagtcgtaaaaatgatggataagacgattgatggtttctct
gaaatcatcccagtcgcgactaaaaaggatggaagcttccgaaaaggatcctcgacaatg
gaaaaggaacaattcgatgatgtccgctcatttatacggtcaaaaatcggttcgatcggt
tcagatatcatgaatggtaatattgatatctcaccttatgaaatgcaaaaaaagactccg
tgcacgtactgttcattccggtcggtatgtcaattcgatcactcgctggaagaaaacgat
tatcgaatcctgaaagatatgaaagaagatgaattattcaatttgttcaaaaagaaagga
ggagatggaaatgcgtga
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