Pseudalkalibacillus nanhaiensis: V1497_12630
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Entry
V1497_12630 CDS
T11239
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh03030
DNA replication
pnh03430
Mismatch repair
pnh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V1497_12630 (holA)
03430 Mismatch repair
V1497_12630 (holA)
03440 Homologous recombination
V1497_12630 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnh03032
]
V1497_12630 (holA)
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_12630 (holA)
Enzymes [BR:
pnh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V1497_12630 (holA)
DNA replication proteins [BR:
pnh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
V1497_12630 (holA)
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
V1497_12630 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
HP_1247_M
OSK
DUF1848
RsmJ
Motif
Other DBs
NCBI-ProteinID:
XNY62036
LinkDB
All DBs
Position
complement(2411382..2412416)
Genome browser
AA seq
344 aa
AA seq
DB search
MSINELTKKLKNEAYSSLYLLYGKEKYILEYSQKLIVQAVLDEGSADFNLSSYDMEEQPI
EAAIEDAETLPFMGDHRVVIIQNPYFLTGAKVKQKVEHDLKKLEQYLQNPSEQAIVIFIA
PYEKLDERKKIVKALKKQGEVIQAEKMNVQLQKEWINHASKEANVKMTDEAVERLIELQG
ENLGLLIGEVNKMALYVGEGGVIEPSIVDELISRSLESNVFTMVEHVANRRIDAALRICY
DLLKQNEESIKLMALLARQFRIILQVKQLKAQGFTEKKMASILSLHPYAVKIASRQSRAF
SEEELKDLLIRAADADFEMKTGQRDKQLSLELFMTGIHKAKQTN
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
ttgtcgattaatgaattgaccaagaagttgaagaatgaagcttattcttcgctttattta
ttatatggaaaagaaaaatacatattagagtactctcagaagctgattgtacaagctgtt
cttgacgaagggtcggcagatttcaacttgtcttcatacgatatggaggaacagccgatc
gaagctgccattgaagatgctgaaacacttccttttatgggggatcatcgagtggtgatc
attcagaatccatatttccttacaggcgcaaaagtgaagcaaaaggttgaacacgacctg
aaaaaacttgagcaataccttcagaatccatctgaacaagcgattgttatcttcattgct
ccttatgaaaaattggatgaacggaaaaaaatcgtcaaggcgcttaaaaagcaaggagaa
gtcatccaagctgaaaaaatgaatgttcagctccaaaaagaatggattaatcatgcgtca
aaagaagcaaacgtcaaaatgacggatgaagcggtcgaacgtttgattgaactccaaggt
gaaaacctcggactgcttattggagaagtgaacaaaatggcgctttacgttggtgagggc
ggtgttatagaaccgtcaatcgttgatgaattgatttcccgatcgctggaaagcaatgta
tttacaatggtagaacatgttgccaatcgacgtattgatgcggcgctccgcatttgttat
gacctcttgaaacagaatgaagagtcgatcaagcttatggcactgctagcccggcagttc
cggatcatcctccaagtcaaacagttgaaagctcaaggtttcactgagaaaaaaatggct
tccatcctatctctgcatccttacgccgtaaaaatagccagcagacaaagcagagctttt
tcagaagaagaactgaaagatctgttaattcgtgcagcagatgcggatttcgaaatgaag
acaggccaacgggataaacaactctccctcgagctgttcatgacagggatccacaaggcg
aaacaaacgaattaa
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