Pseudalkalibacillus nanhaiensis: V1497_13080
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Entry
V1497_13080 CDS
T11239
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
V1497_13080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnh03400
]
V1497_13080
Enzymes [BR:
pnh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
V1497_13080
DNA repair and recombination proteins [BR:
pnh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
V1497_13080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
HHH_5
UvrD-helicase
T2SSE
AAA_22
AAA
nSTAND3
AAA_28
NPHP3_N
NTPase_1
ABC_tran
AAA_16
DEAD
TsaE
DUF4926
AAA_17
Motif
Other DBs
NCBI-ProteinID:
XNY62123
LinkDB
All DBs
Position
complement(2498511..2500805)
Genome browser
AA seq
764 aa
AA seq
DB search
MELQGQLQLGNEEKTYVKGSILHVIYQNAETYYTVLKVKTSGTNLAEIEKELIVVGAFPV
LLEDESYIFWGDMKEHPKYGKQFVVDFYRKDLPRTEDGMILYLSSDLFNGIGKKTAEKVV
RTLGDNAFSKILEDPEVLNEISSLTEERARTIYETLMEHQGLEQLLSTLHNYGIGPSIAM
KIYQTYQQESLSVIQSNPYQLIYDIDGVGFKRADEIGQALGIEDTSSERIQAGILYCLKE
LSNQQGHTYMPVDELIQETKRLLFNGQVDDEEIDFYSEIVSLHGDGKAYIEEENAYLPSL
FFSERGLIQSIDKIMKQDEYDRVELSDFYNALGELEEHQGIEYAEAQKDAIYKALTSPMM
ILTGGPGTGKTTVIKGIIEVYAEIHGLSLDPKDYEKNEYPFLLVAPTGRAAKRMSESTGL
PAVTIHRLLGWKGGSGFEYGEDNPIAGRLLIIDEMSMVDLRLAYRLFDALPEHIQVVMVG
DEDQLPSVGPGQVLKDLIDSTVIPTVQLDEIYRQAKGSTIIQLAHEMKNGTLPDDLHAPQ
RDRRFFPCKQDQVTQAILQVCKSAMSKGYTAKDVQVLAPMYRGRAGIDELNKELQEMFNP
PNEQKREINHFETIYRVGDKVLQLVNVPEEQIFNGDIGEIVSIIYAKETTDKEDQIVISF
DGIEVTFKKTDLTQITHAYCCSIHKSQGSEFPIVVLPIVRGYFRMLRRNLIYTAVTRSKE
YLILCGEMEALERAVQQNETSRRNSNLSSKLKGYLEQQVEQENV
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggaattacaaggacaactccaactcgggaatgaagaaaagacatatgtgaagggttcg
attctgcatgtcatttatcagaatgccgaaacctattacaccgttctgaaggttaaaacc
tctggaacgaatcttgccgaaattgaaaaggaactgattgtcgtcggcgcatttccagta
ctgctggaggatgaatcgtatattttctggggagatatgaaagagcatccaaaatacggc
aagcagtttgtggtcgatttttatcgtaaagatctgccccgtacagaagatggaatgatt
ctctatttatcgagtgacctttttaatgggatcgggaagaaaacggcagaaaaggtcgtt
cggacattaggcgataatgcattctcgaaaattctcgaggacccggaagtcttgaatgaa
atatcgagcttaacagaagaaagagcccgtacgatttatgagacgctgatggagcatcaa
gggctggagcagctgttaagcaccctacataactatggtatcggtccttccattgccatg
aaaatttatcagacatatcagcaggaatccttgtccgtcattcaatcgaatccctatcaa
ctgatttacgatattgatggagtcggcttcaaaagagcagatgaaatcggtcaggcttta
ggcatagaagacacttcttctgaacgtatccaggcaggtattttgtattgcctgaaggag
ctttccaatcaacaaggacatacgtatatgccggttgacgagctgatccaagaaacgaag
cggctcttgttcaatggccaggttgatgatgaggaaattgatttctacagtgagattgtg
tctctacacggagatggaaaagcgtatatcgaggaagagaatgcttaccttccttcattg
tttttctcggaacgtggtcttattcaatcgatcgataaaatcatgaaacaggatgaatat
gatcgtgttgagctatcagacttttacaatgccctcggtgagcttgaagagcatcaaggt
attgaatatgcggaagcccaaaaagatgcgatctacaaagcattgacctcaccgatgatg
atcctgacagggggcccaggtacaggtaagacgaccgtcataaagggaattattgaggtt
tatgctgaaattcatggtctatcccttgatccaaaggattatgagaaaaatgagtatcca
ttcctgttggtggcaccgacaggccgagcggccaaacggatgagtgaatccacagggctt
ccagcggttacaatccataggcttctcggatggaaaggtggaagcggcttcgagtatggc
gaagataatccgatcgctggccggttgttgattattgatgaaatgtcgatggtcgatctc
cgtctcgcataccggctgtttgatgcacttccggagcatatccaggtcgtgatggtaggg
gatgaggatcagttgccttccgtaggacctgggcaggtactgaaggacttgattgattcc
actgtaatccctacagtccagctcgatgaaatttaccggcaggcgaaaggatcgaccatt
atccagcttgcacatgaaatgaagaatgggactctgcctgacgaccttcatgcacctcag
cgagatcgacgttttttcccatgcaaacaagaccaggtgacacaagcgatcctacaagtc
tgtaagagcgcaatgtcgaaaggttacacagcgaaggacgtccaagttcttgcacctatg
tatcgggggcgtgctgggattgatgaactgaacaaagaattacaagagatgttcaatcca
ccgaatgaacaaaaacgagaaattaaccattttgaaacgatttaccgagtaggggataaa
gtccttcaactggtcaatgtacctgaagaacagatcttcaatggtgatattggtgaaatc
gtgtctattatttacgcaaaggaaacgacagacaaagaggatcagattgtcatttcattc
gatggcattgaagttaccttcaagaaaacggaccttacccaaatcacccatgcatattgc
tgttccatccataaatcccagggaagcgaatttccgatcgtcgtccttccaatcgtcaga
gggtattttcggatgttgagaaggaacctgatctatacagcagtgacccgaagcaaagag
tacttgatcctttgcggtgaaatggaggcgctggagcgtgctgtgcaacaaaatgagaca
agccgccgaaattccaatctaagttcaaaattgaaaggatatcttgaacaacaagtagag
caggagaacgtataa
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