Pseudalkalibacillus nanhaiensis: V1497_13125
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Entry
V1497_13125 CDS
T11239
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
V1497_13125 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pnh01007
]
V1497_13125 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnh03016
]
V1497_13125 (aspS)
03029 Mitochondrial biogenesis [BR:
pnh03029
]
V1497_13125 (aspS)
Enzymes [BR:
pnh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
V1497_13125 (aspS)
Amino acid related enzymes [BR:
pnh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
V1497_13125 (aspS)
Transfer RNA biogenesis [BR:
pnh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
V1497_13125 (aspS)
Prokaryotic type
Other AARSs
V1497_13125 (aspS)
Mitochondrial biogenesis [BR:
pnh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
V1497_13125 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2d
DUF4443
Motif
Other DBs
NCBI-ProteinID:
XNY62131
LinkDB
All DBs
Position
complement(2508536..2510320)
Genome browser
AA seq
594 aa
AA seq
DB search
MIGRTHHCGKITEQDIGASVQLKGWVQKRRDLGGLIFIDLRDRSGIVQVVVNPEVSKEAA
EIADKVRNEYVMDIKGTVVARDESTINEKMPTGHIEIKAEHVEILNAAKTPPFMISDKEE
ISEDIRLKYRYMDLRRPIMQETFKMRGKVTKQIRDFLDGYDFLEMETPMLTKSTPEGARD
YLVPSRVHPGQFYALPQSPQIFKQLLMVSGFERYYQIVRCFRDEDLRADRQPEFTQVDIE
TSFMDQEDLFEMTEQMMAQVLKETKGITIQTPIPRMTYHEAMDRYGSDKPDTRFGMELIN
VSDLVKDSDFKVFASTVESGGEVKGINVSGKADQFSRKDIDQLTDFVKVYGAKGLAWLKV
EQDGLKGPISKFFDEDMQKQLTEAFAAKEGDLLLFVADKPKVVAESLGALRLKLGKELEL
IDKEKFNFLWVVDFPLLEFDEDANRYVAAHHPFTMPRKEDLHLLETDPVNVRAQAYDLVL
NGYEVGGGSQRIYQKDVQERMFKALGFTLEQAYDEFGFLLDAFEYGTPPHGGIALGLDRL
VMLIAGRQNLRDTIAFPKTASASDLLTNAPSEVSQQQLDDLHLNVKKAKVTNES
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgattggaagaacccatcattgcggcaaaattacagaacaagatatcggagcaagtgtt
caattaaaggggtgggtccaaaagcgtagggaccttggtggtttgattttcatcgattta
agggaccgttcaggtatcgtgcaagtcgtcgtgaaccctgaagtttcgaaggaagcagca
gaaatcgctgataaagtacgtaatgaatatgttatggatatcaaaggaacggtcgtagct
cgtgatgaatcaacgattaacgagaaaatgccgacaggacacatcgaaatcaaagcggag
catgttgaaatcttgaatgctgcgaaaacacctcctttcatgatttcggataaagaggaa
atcagtgaggatatccgactgaaataccgctatatggacctacgacgtccaatcatgcag
gaaacgttcaaaatgcgaggcaaggtgaccaagcaaatccgcgatttcctggatggttat
gatttccttgagatggaaacgccgatgctgacaaaaagcacgcctgaaggtgctcgtgac
tatctcgtgccgagtcgtgtccatccgggacagttttacgcgttgccgcagtctcctcaa
atcttcaagcaattattgatggtttcaggatttgagcgttactaccaaatcgtacgctgt
ttccgggacgaagaccttcgtgcagaccgtcaaccggagttcacccaagtcgatatcgaa
acatcgttcatggatcaggaagacttgtttgagatgactgaacagatgatggctcaagtt
ttgaaagaaacaaaaggcattacgatccaaacaccaattccacgtatgacgtatcatgaa
gcgatggaccgatacggttccgataagccggatacacgcttcggtatggaattgatcaat
gtatccgatcttgtaaaggattccgacttcaaggtgttcgcatcaacagtcgaatcgggc
ggagaagtaaaaggaatcaatgtgagtggaaaagcggatcaattctcacgtaaagatatc
gatcaattgacggactttgtaaaagtttacggcgctaaaggtctagcttggttgaaggtc
gaacaggatggccttaaaggaccgatctcgaaattctttgatgaggatatgcaaaagcaa
ttgactgaagcatttgcggctaaagaaggagacctccttctgttcgttgcagataaaccg
aaggtagtagcagaaagtctcggagcccttcgattgaagctaggtaaggagcttgagctg
atcgataaagagaagttcaacttcctttgggtcgtagacttcccattgcttgagtttgat
gaagatgccaaccgttatgtcgcagctcaccatccattcacaatgccacgcaaggaagac
ttgcatttacttgaaacggatccagtcaacgtccgtgctcaagcgtatgaccttgtcttg
aacggctatgaagtgggtggaggatcacaacgtatttatcaaaaggatgtccaggagcgg
atgttcaaagccctaggatttacactggagcaagcctatgatgaatttggattcttactc
gatgctttcgaatacggtacacctcctcatggtggtatcgcgctaggacttgaccgactt
gtcatgttgatcgcaggtcgtcaaaatctgagagatacgattgccttcccgaaaacggca
agcgcaagcgatctactgacaaatgcaccaagtgaagtcagtcagcagcaactcgatgac
ctgcacttgaacgtgaagaaagcgaaagtaacaaacgaatcgtaa
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