Pseudalkalibacillus nanhaiensis: V1497_17710
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Entry
V1497_17710 CDS
T11239
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pnh Pseudalkalibacillus nanhaiensis
Pathway
pnh00260
Glycine, serine and threonine metabolism
pnh00460
Cyanoamino acid metabolism
pnh00630
Glyoxylate and dicarboxylate metabolism
pnh00670
One carbon pool by folate
pnh00680
Methane metabolism
pnh01100
Metabolic pathways
pnh01110
Biosynthesis of secondary metabolites
pnh01120
Microbial metabolism in diverse environments
pnh01200
Carbon metabolism
pnh01230
Biosynthesis of amino acids
pnh01240
Biosynthesis of cofactors
pnh04981
Folate transport and metabolism
Module
pnh_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pnh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
V1497_17710 (glyA)
09102 Energy metabolism
00680 Methane metabolism
V1497_17710 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
V1497_17710 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
V1497_17710 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
V1497_17710 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
V1497_17710 (glyA)
Enzymes [BR:
pnh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
V1497_17710 (glyA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
XNY62988
LinkDB
All DBs
Position
complement(3419432..3420667)
Genome browser
AA seq
411 aa
AA seq
DB search
MEQLQKQDAELFNSIQEELGRQRNKIELIASENFVSQAVMEAQGSVLTNKYAEGYPGRRY
YGGCEHVDVVENLARDRAKKLFGAEHANVQPHSGAQANMGVYFTVLEPGDTVLGMNLSHG
GHLTHGSPVNFSGKLYNFVEYGVDEKDHTIQYDDVLALAREHQPKLIVAGASAYPRQIDF
KKFREIADEVGAYLMVDMAHIAGLVATGLHQSPVPYADFVTSTTHKTLRGPRGGLILCKE
EFAKKIDKSIFPGIQGGPLMHVIAAKAVAFGEALQDDFRTYTKAIVDNARALGDALKEEG
LSLVSGGTDNHLLLVDVRSMNVTGKVAERLLDDIGITTNKNTIPFDPESPFVTSGLRLGT
AAVTTRGFDADDMKEIASIIALVLRSPDDEQVMKEASERVETLSSKYKLYE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggaacaacttcagaagcaagatgcagaattattcaactcgatacaggaagaattagga
cgacagcgaaacaagattgaattaatcgcgtccgagaactttgtaagccaggcggtcatg
gaagcgcaagggtctgtccttacgaacaaatatgcagaaggctaccctggacgtcgttat
tatggcggctgtgaacacgttgatgtcgtagaaaatctagcgagagaccgtgccaagaaa
ttgtttggcgcagagcatgcaaatgtgcagccgcattctggtgctcaagcgaacatgggg
gtctatttcacagtattggagccaggcgataccgtgcttggaatgaacttgtcacatggc
ggtcacctgacacacggaagcccagtcaacttcagtggtaagctttataactttgtcgag
tacggcgtggatgagaaagaccatacgatccagtatgatgatgtattagcgttagcgaga
gaacaccaaccgaagctgattgttgcaggtgcaagcgcttacccaagacaaatcgacttc
aagaagttccgcgaaatcgctgatgaagtcggagcatacttgatggtcgacatggcgcac
attgccggtcttgttgcgacaggactacaccagagcccggtcccttatgcagactttgtg
acgtcgacgacgcacaagacgttgcgaggccctcgtggcggtttgattctttgtaaggaa
gagtttgcgaagaagatcgataaatcaatcttcccagggatccagggtggtccattgatg
cacgtcatcgctgcgaaagcagtcgcgtttggagaagcgcttcaggacgacttccgcaca
tatacgaaagcgattgtggacaatgcccgcgctctaggtgatgcattgaaggaagaagga
ttgtcacttgtatccggtggtacggataaccatctcttgcttgtcgacgtacgaagcatg
aacgtgacggggaaagttgcggagcgtcttcttgatgatatcggcattacgacgaacaag
aacacgataccgttcgatcctgaaagcccgttcgtcacaagtggtttgcgcctcggtaca
gcagcggttacgacgagaggattcgatgcagatgacatgaaggaaatcgcatccatcatc
gcacttgtcctacgcagcccggatgatgagcaggtaatgaaggaagcgagcgaacgcgtc
gaaacgctctcctccaaatacaagctgtacgaataa
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