Prevotella nigrescens: J5A59_00985
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Entry
J5A59_00985 CDS
T07424
Name
(GenBank) Smr/MutS family protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
pni
Prevotella nigrescens
Pathway
pni03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
J5A59_00985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pni03400
]
J5A59_00985
DNA repair and recombination proteins [BR:
pni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
J5A59_00985
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
Smr
MSSS
MutS_III
TetR_C_43
DehI
ApoLp-III
Motif
Other DBs
NCBI-ProteinID:
QUB51004
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Position
2:complement(202432..205065)
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AA seq
877 aa
AA seq
DB search
MIYPNNFEQKIGFNEIRSLLHERCLSTLGREQVDCMEFSSDTTQINRWLTEVREFRRIQD
GLEPFPLDNVFDVRASVARIRLEGTHMEEDELFDLKRSLETIIAVVKFLSAGEALPNGEI
QRTYPTLYALSDGVATFPVLVQRISQIIDKFGKMRDSASPDLLQIRRELARVESSISRTL
THILHSAQSEGVVDRDVTPTMRDGRLVIPVAPGMKRKISGIVHDESATGKTVFIEPAEVV
EANNKIHELENEERKEIIRILREFAKQVRPHVREILDSYHFLALIDFIRAKAELARMFKA
IEPEVGTEPYIDFIRAIHPLLQLSLAKKQRTAENSDAPDSVVPLDIQLTKEKHLLIISGP
NAGGKSVCLKTVGLLQYMLQCGLSIPVSERSTAGTFQNLMIDIGDEQSIENDLSTYSSHL
MNMKAMMRQANSHTLILIDEFGTGTEPQIGGAIAEAVLKQFWKKQAWAVITTHYQNLKHF
AEDHKGVVNGAMLYDRHEMRPLFQLAIGRPGSSFAIEIARKTGIPEEVISDASAIVGSDY
IQSDKYLQDIVRDKRYWEAKRQTVHSHEKELERTIAKYEKELEELRQNRKEIIKKAKEEA
EEIIRESNKRIENTIREIRQQQAEKEATKRIRQELAAYEQSMLDGSTTSSGRKDNAKTPK
ANNKQAMREGGLMTDEELQARIEKIKNRKERHERHLHEKEERKQNAAEGLRAAGEKRAAA
RPIGVNDTVRIKGLTSIGTVETTDNKQAVVIFGGMRTKMALSRLERVDENTMKESQKQFA
AYSYSRQTRETIDEHRNQFKQEIDVRGMRTDEALNQVQHFIDDAILVGVSQVRILHGKGN
GILRTMIRQYLNAIPNVRNTRDEHVQFGGAGITVVEL
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgatatatcccaacaattttgaacagaaaataggtttcaacgaaattcgttcgctactg
cacgaacgctgtctttccacgctcggacgcgagcaggtagactgcatggagttctcttcc
gacacgacacagattaaccgttggctgaccgaagtgcgcgagtttcgccgcattcaggac
ggtttagaaccctttccactcgacaacgtgttcgatgtccgggcaagcgtggctcgcatt
cgccttgaaggcacgcacatggaagaggacgaactcttcgacttgaagcggtctttggag
accatcattgcggttgttaagttcctaagtgcgggcgaagcgttgccaaatggagaaata
caacgcacctaccctaccctttatgcgctttccgatggcgtggcaacgttcccagtcttg
gtgcaacgcatcagccaaatcatcgataaattcggcaaaatgcgcgattcggcatcgcca
gacctgctccaaatccgccgagaactggctcgtgtggaaagcagcatatcgcgcacgctg
acccatatcctgcattcggcacagagcgagggcgtggtagaccgcgacgtaacaccgacc
atgcgcgacggacgcttggttattccagtggctccgggcatgaaacgcaagatttcgggt
attgtacacgacgagagtgcaacgggaaagacggtcttcatagagcctgccgaggtggtg
gaagccaacaacaagatacacgaattggagaatgaggaacgcaaagagattatccgcata
ctccgagagtttgccaaacaggtgcgtccgcacgtccgcgaaatcctcgattcctatcat
ttccttgcccttatcgactttatcagggcgaaagcagagctggctcgtatgttcaaagcc
attgaaccggaagtcggaacagagccgtacatcgactttattcgtgccattcacccgctg
ttgcagctttcgttggctaagaaacagcgcacggcagagaacagtgacgcccctgacagc
gtggttccgctcgacattcagcttacaaaagagaaacatttgcttattatttccggacca
aatgccggaggaaagtcagtctgtctgaaaaccgtcggactgcttcagtatatgcttcag
tgtggtctttcaatcccagtgagcgaacgttccaccgcaggaacgttccagaacctcatg
atagacattggtgatgagcagagtatagagaacgatttaagtacatattcatctcatttg
atgaacatgaaagccatgatgaggcaggcaaacagccacacgctcatcttgatagacgag
ttcggaacgggcacggagccgcagataggcggtgcaatcgccgaagctgtgctgaaacag
ttctggaaaaagcaggcgtgggcggtgataacgacccactatcagaaccttaagcacttc
gcagaagaccacaaaggagtggtgaacggggctatgttgtacgacagacacgagatgcga
ccgctctttcagttggctatcggtcgtccgggcagctcgtttgccatagaaatagcgcgc
aaaacgggtattcccgaagaagttatcagcgatgcttctgccattgttggctcggattac
atacagagcgacaagtatttacaggatattgttcgagataaacgctattgggaagcaaag
cgacagaccgtgcacagccacgaaaaggaactggaacgaaccattgccaaatacgaaaag
gaactggaagagctgcgccaaaatcgtaaggaaattataaagaaggcgaaagaagaggcg
gaggagataatccgagaaagcaacaagcgcattgaaaacaccattagagagatacgccaa
cagcaggcggagaaagaagcaacgaaacgtattcgacaggaacttgctgcctacgagcaa
tctatgctcgacggttctacaacatcttcaggtagaaaagacaacgcaaagacaccgaaa
gcaaacaacaagcaagctatgcgcgaaggtggtttgatgaccgacgaggaactgcaggca
cgcatagaaaagataaagaacaggaaagaacgacacgaacgccacctgcatgagaaggaa
gaacgcaagcagaatgctgccgaaggactgagggcggctggcgaaaagcgggctgccgcc
cgaccaattggcgtaaatgacaccgttcgcatcaagggattgacatcgattgggacggtt
gagacaaccgataacaagcaagctgtggtgatatttggcggaatgcgcaccaagatggcg
ctgtcgcggcttgaacgtgtagacgaaaacacgatgaaagaaagtcagaaacagtttgca
gcatacagctatagccgacagacccgggagacgatagacgagcatcgcaaccagttcaaa
caagaaatagacgtgcggggaatgcgcaccgacgaggctttaaaccaagtgcaacacttc
attgacgacgccattcttgttggcgtgagccaagtgcgcatacttcatggaaaggggaac
ggcattctgcgcaccatgataaggcagtatctgaatgccattccgaacgtcaggaacacc
cgggacgagcacgttcagttcggaggagccggcataacggtagtagaattatag
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