Prevotella nigrescens: J5A59_01060
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Entry
J5A59_01060 CDS
T07424
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pni
Prevotella nigrescens
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pni03400
]
J5A59_01060 (radA)
DNA repair and recombination proteins [BR:
pni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
J5A59_01060 (radA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
AAA
AAA_22
GvpD_P-loop
AAA_16
AAA_24
TniB
AAA_14
CobU
nSTAND3
Zn_ribbon_3
SLFN-g3_helicase
Zn_ribbon_8
NTPase_1
AAA_5
AAA_29
DZR
Isochorismatase
Elong_Iki1
DUF7129
HypA
Motif
Other DBs
NCBI-ProteinID:
QUB51019
LinkDB
All DBs
Position
2:221846..223225
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AA seq
459 aa
AA seq
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MAKDKIAYVCDNCGQESAKWIGRCPNCGQWNTFKQIRIAPDVGVSSAKTLVSHTFGAMKQ
NVPQALREVSSTEEIRVDMKDSELNRVLGGGLVVGSMVLIGGEPGIGKSTLTLQTLLSSD
RRVLYVSGEESPQQIKMRALRISDTIPENIVILSETSIEKIFNSIKEVKPELLVIDSIQT
VATETVASSAGSISQIRESAAALLQLAKSSDIPVILIGHINKEGSIAGPKVLEHIVDTVL
QFEGDQHYMYRILRSIKNRFGSTSELGIYEMRQDGLRPVSNPSELLLTDTPGDLSGVAIS
SAIEGVRPFLVETQALVSSAAYGTPQRSATGFDQRRLNMLLAVLEKRVGFKLMQKDVFLN
IAGGLRITDMAMDLSVIAAVLSSNVDTPIEAGWCMAGEVGLSGEVRPVNRIEQRIAEAEK
LGFSNIIIPKNNAQGLKGRFKIATHSVAKVDEALRLLFG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagacaaaatagcatacgtctgcgacaactgtggacaggaaagcgcgaagtgg
atagggagatgtcctaattgtggacagtggaacacattcaagcaaatcaggatagctcca
gatgtgggcgtgagcagtgcgaagacacttgtctctcatacatttggtgccatgaaacag
aatgtgccacaagcacttagagaagtttcttcgaccgaggagattcgtgttgatatgaaa
gacagcgaactgaatcgtgtgcttgggggaggactcgttgtgggaagcatggtgttgata
ggtggcgaacccgggatagggaagagtactttaacgcttcagacgctgttgtcttccgac
cgcagagtgctctatgtaagcggagaagagagtccacagcagataaaaatgagagctttg
cgcatttcagatactattccagaaaacattgtgatattgtctgaaacatcaatagagaag
atattcaacagcattaaagaagttaagcctgaacttctggtaatagattctatacaaacg
gttgccacggaaacggttgcgagtagtgcagggagtatttcccagatacgggaaagtgct
gctgcattgttgcaattggcgaaatcgagcgatattcccgtcattcttatcgggcatatt
aacaaggaaggctctattgcagggccgaaagtgttggaacatattgtagacacagtgctg
caattcgagggagaccagcactatatgtatcgtattctgcgtagtataaagaaccgcttt
ggctctacttccgaattagggatatacgagatgcgccaagatgggttgcgaccggttagc
aacccttcggagttgttgcttaccgatactcctggtgatttgtcgggtgtagccatatca
agtgctatcgaaggggtgcgccctttccttgtagagactcaggcgcttgtttcgtcggca
gcctatggcactccacagcgttcggcgacggggttcgatcagcgtcggctgaatatgttg
cttgccgtactcgaaaagcgtgtaggatttaagctgatgcaaaaagacgtgtttctgaat
attgccggtggtctgcgcattacagatatggctatggatttgagtgtgattgctgcagtg
ttgtcgtcgaatgtggatacacctatcgaagcggggtggtgtatggctggagaggttgga
ttgagtggcgaagtccgcccggttaaccgtattgaacaacgcatagccgaagccgagaag
ttaggatttagtaatatcattatcccaaagaacaatgcacaaggactaaaaggtcgtttt
aaaattgcaacacattctgttgctaaagttgatgaggcattacgcttgttgtttggataa
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