Prevotella nigrescens: J5A59_04735
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Entry
J5A59_04735 CDS
T07424
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pni
Prevotella nigrescens
Pathway
pni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
J5A59_04735 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pni03019
]
J5A59_04735 (pnp)
03016 Transfer RNA biogenesis [BR:
pni03016
]
J5A59_04735 (pnp)
Enzymes [BR:
pni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
J5A59_04735 (pnp)
Messenger RNA biogenesis [BR:
pni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
J5A59_04735 (pnp)
Transfer RNA biogenesis [BR:
pni03016
]
Prokaryotic type
tRNA degradation factors
J5A59_04735 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KH-I_KHDC4-BBP
ORF6C
RNase_II_C_S1
DAPDH_C
Motif
Other DBs
NCBI-ProteinID:
QUB52402
LinkDB
All DBs
Position
1:complement(472528..474744)
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AA seq
738 aa
AA seq
DB search
MNVITKTLQLADGRNITIETGKVAKQADGAAVIRMGNTVLLATVCAAKEAVPGTDFMPLQ
VDYREQYAAAGRFPGGFTKREGKANDDEILTSRLVDRVLRPLFPSDYHTEVFVNVMLLSA
DGVDMPDALAGFAASVAMQCSDIPIEHPISEVRVARVNGEYIIDPTSEQMKEADMDIMVG
ATKENIMMVEGEMDEVSEQDLINALKAAHDAIKPMCEIQEELAKELGTDVKREYCDEVND
EELREQVKKETYDACYAQAQSGDNDKKHREEVYDKIKSDFIERYDAAHTDLSEDDLEEKH
AQIERYYADVQRDSMRRSVLDTGKRMDGRACDEIRPIWCEVDPLPMPHGSAYFQRGETLA
LATCTLGTKLDEKMVDNVLDKSYQRFLLHYNFPPFCTGEAKAQRGVGRREIGHGHLAWRG
LKGMIPEDFPYTVRLVSQVLESNGSSSMATVCSGTLALMDAGVPIKKPVSGIAMGLIKNP
GEEKYAVLSDILGDEDHLGDMDFKTTGTRDGITATQMDIKCDGLSFEILEKALMQAKQAR
EYILGKIVETIPEPRKEMKPQVPRIETLEIPKEFIGAIIGPGGKIIQQMQEESGATITID
EVDGVGKIQVSAPNKTAIDAAMGKIKSIVAVPEIGEIYEGTVRSIMPYGCFVEILPGKDG
LLHISEIDWKRLATVEEAGIKEGDKLQVKLLDIDPKTGKYKLSHRCLLEKPEGYVEPQRR
PRGDRGERRPHRDGNHRS
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtaattacgaaaactcttcaattggctgatggaagaaacatcacaattgaaact
ggaaaggttgcaaagcaagccgatggcgcagcagtaatcagaatgggtaacactgtgctc
ctcgcaacagtttgtgcagccaaagaggcagttccaggtacagactttatgcctttgcaa
gtagattatcgcgaacaatacgcagctgcaggtagatttcctggtggttttactaaacgc
gaaggcaaagccaacgatgacgaaatactaacttcacgtcttgtagaccgtgtgcttcgt
ccccttttcccttcagattatcacacagaagtattcgtgaatgtaatgcttctttcagct
gacggcgttgatatgcccgatgccttggcaggatttgcagcatcggtagctatgcaatgc
tcggatattcctatcgaacacccaatctctgaagtgcgcgtagcacgtgtaaacggagaa
tatatcatcgacccgacctccgaacaaatgaaagaagccgatatggatatcatggtcggt
gccaccaaggaaaacatcatgatggtggagggcgaaatggacgaggtgtcagaacaagac
cttatcaacgcccttaaagcagcgcacgatgctatcaagcctatgtgcgagatacaggaa
gaacttgcaaaggaactcggtacagacgttaagcgcgaatattgcgacgaagtgaacgac
gaagaactccgcgagcaggtgaagaaagaaacgtatgacgcttgctatgcacaggcacag
agcggcgacaacgacaagaagcaccgtgaagaagtttacgacaagattaagtcggacttc
atcgaacgctacgatgcagcacataccgacctttcggaagacgacctcgaggaaaaacac
gcacagattgaacgttattacgctgatgtacagcgcgactcaatgcgccgcagcgttctt
gatacaggcaagcgcatggacggccgtgcatgcgatgaaattcgcccaatatggtgcgaa
gtagatccactgcctatgcctcacggaagcgcatacttccaacgtggcgaaacattggca
ctcgctacttgtacattgggtacgaagttggacgagaagatggtagacaacgtgctcgac
aagagttaccaacgcttccttcttcattataatttccctcctttctgtacgggcgaggca
aaggcacaacgtggtgttggccgtcgcgaaattggccacggacacttggcttggcgcggt
ttgaagggcatgataccagaagatttcccttacacagtgcgtcttgtaagtcaggtattg
gagtctaacggctcttcttctatggcaaccgtatgttcgggaacacttgctttgatggac
gctggtgtgcctatcaagaagccagtatcgggtattgcaatggggttgattaagaatccg
ggcgaagaaaagtatgccgtgctcagcgatattcttggcgacgaggaccatttgggcgat
atggacttcaagacaacaggtacacgcgacggtattacagcgacacagatggatatcaag
tgcgacggactttcgtttgaaatcctcgaaaaggcacttatgcaggctaaacaggctcgc
gaatacattctcggcaagatagtagaaaccattcctgaaccacgcaaagagatgaaacca
caggttccacgtattgaaactctcgaaattccaaaagaatttattggtgctattattggt
cctggtggtaagataattcagcaaatgcaagaagaaagtggagctactattaccattgac
gaagttgatggtgtaggtaaaattcaggtttctgcacccaataaaactgcaattgatgct
gcaatgggcaaaattaaatcaattgttgccgtaccagaaataggagaaatttacgaaggt
acagttcgttctattatgccttatggttgctttgttgagattttaccaggtaaagatggc
ttgctccatatttcagaaatcgactggaagcggcttgctaccgttgaagaagctggcatt
aaggaaggcgacaaacttcaagtcaagctcctcgacatcgaccctaagacgggtaagtac
aaactttcacaccgctgcttgcttgaaaagcctgaaggttatgtagagccacagcgtcgt
ccacgtggcgacagaggcgaacgccgcccacatcgcgatggcaatcaccgttcataa
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