Prevotella nigrescens: J5A59_05025
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Entry
J5A59_05025 CDS
T07424
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pni
Prevotella nigrescens
Pathway
pni00020
Citrate cycle (TCA cycle)
pni00640
Propanoate metabolism
pni00660
C5-Branched dibasic acid metabolism
pni00720
Other carbon fixation pathways
pni01100
Metabolic pathways
pni01110
Biosynthesis of secondary metabolites
pni01120
Microbial metabolism in diverse environments
pni01200
Carbon metabolism
Module
pni_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
J5A59_05025 (sucD)
00640 Propanoate metabolism
J5A59_05025 (sucD)
00660 C5-Branched dibasic acid metabolism
J5A59_05025 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
J5A59_05025 (sucD)
Enzymes [BR:
pni01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
J5A59_05025 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
KARI_N
Motif
Other DBs
NCBI-ProteinID:
QUB52454
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All DBs
Position
1:541831..542703
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AA seq
290 aa
AA seq
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MSILINKDTRLIVQGITGRDGSFHATKMKEYGTNVVGGTSPGKAGQEVAGIPVFNTVRDA
VEATNANTSVIFVPAAFAKDAMLEAADAGIKLIICITEGVPTLDVVEAYRYIQIKGAQLI
GPNCPGLISPAESMVGIMPTNIFKKGHTGVISRSGTLTYQVVAALTAEGLGQSSAIGVGG
DPIVGLYFQELLEMFQNDPETDSIAIIGEIGGDAEERAAEYIKQYVTKPVVAFISGREAP
KGKQMGHAGAIISSSSGTAAEKVAAFEAAGIPVARETYEIPILLKQKLSK
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttaattaataaagatacacgccttattgttcaaggtattactggtcgcgat
ggtagcttccacgctacaaagatgaaagaatatggtactaacgttgtaggtggcacgtcg
ccgggcaaggctggacaagaagttgcaggcattcctgtattcaatactgtccgcgatgca
gtagaggcaacgaatgcaaacacttctgtaatcttcgttcctgctgcttttgcaaaagat
gcaatgctcgaagctgctgatgcaggcatcaaattgattatctgtataaccgagggtgtt
cctacgctcgacgttgttgaggcatatcgctatatccaaattaaaggcgcacagcttatc
ggacctaactgtcctggcttaatctctcctgcagagagcatggttggcattatgccaaca
aacatcttcaagaaaggacacacgggtgtcatcagccgttcaggtactttgacctatcag
gttgtggctgcgcttactgcagaaggtcttggacaatcatcggctatcggtgtaggtggc
gaccctattgtaggtctttacttccaagaattgctcgaaatgttccagaacgaccctgaa
accgacagcattgcaatcattggcgaaataggtggtgatgcagaagaacgtgcagccgaa
tacattaagcagtatgttacaaaacctgttgttgcctttatttcgggtagagaagcaccg
aaaggcaagcagatgggacatgcgggagccattatctcaagcagttccggtactgctgca
gaaaaggttgctgcgttcgaagctgcaggaatccctgttgctcgtgagacatacgagatt
ccaatactgctaaagcaaaagttaagcaagtaa
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