KEGG   Prevotella nigrescens: J5A59_05380
Entry
J5A59_05380       CDS       T07424                                 
Name
(GenBank) HsdR family type I site-specific deoxyribonuclease
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
pni  Prevotella nigrescens
Brite
KEGG Orthology (KO) [BR:pni00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:pni02048]
    J5A59_05380
Enzymes [BR:pni01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     J5A59_05380
Prokaryotic defense system [BR:pni02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   J5A59_05380
SSDB
Motif
Pfam: SWI2_SNF2 T1R_D3-like ResIII HSDR_N DEAD CbiA DUF6987
Other DBs
NCBI-ProteinID: QUB52511
LinkDB
Position
1:complement(634809..638639)
AA seq 1276 aa
MPVDVLIRPFLKELDFEKALADFLPQHGWEPLVIMNPTEDILIKNWAAIIFNNNRDMNRL
GDFKLTDTEMQQIMTQVDALKNPYEVNQFINGGQVMIKRDNPDDKINFGKEVYLTIFNAR
EIHAGQSVYQIVRQPRFQTKHPLGTTRRGDVVLLINGMPVIHIELKRSGVDVTQAVNQIK
KYAHEGIFSHGIFSLIQIFVAMTPEKTLYFANPGASENFSPSFYFHWADFNNDEVYDWKR
IAANLLSIPMAHQMVGYYTIADDKDETLKVLRSYQYFATTKIWERVRATNWDDHYHKGGY
IWHTTGSGKTMTSFKSAQLIAKANDADKVVFLLDRIELSTQSADEYRGFANADDNVLDTD
DTRNLIRVLESDSKDECLIVTSIQKMSRINSDNSVPQSTIDKINKKRIVFIVDECHRSVT
GSGKESGSGMLLTIKNTFPRAVLFGFTGTPIFPENARGEMTTEVIFGDMLHKYTLASGIP
DKNVLGFDLYREDTFQEHDIREKVALRQADPDAETADDIAKDNEKMDIYNKWMCDTDMLK
VEDEAKSLYATDAHHMAVVQKIVEERPMLSHNGKFHAILATKNIPEAIEYYQLFKKHYPE
YNVTAIFDDSIDNNGGGEYKEEAILEILQDYNDRFDTTFQQSTYAKYKKDVAKRLAHKAP
YQHLEKDKQLDLLIVVTQMLTGYDSKWVNTLYVDKLLQYVDVIQAFSRTNRLFGPDKPFG
IIKYFTRPNRMAKNIEDALALYVDQPLLVFTDKLEANLEKINQSFRVIDQLFKAEGIDYY
ATLPQAEASKKKFAKEFCEMTKRLEAAKMQGFQWEQSEYEFQHTNGWVKLKKELDEQTYK
ILLARYRELFQKGPGGDGDDDDVYQLEAYITETGVGTIDAEYINSKFIKFVKNLYTSGPG
SEHVKVAQAELHNAFASLNQRDQRTAQRILHDIESGDLRLSPGKTIYDYIIDYQKRECDQ
QVYTLAEATGLNITKLQELISKDTTEQNINEQGRFDTLVQTLDKVKAVGFLKRVIGQDVP
KRFVITNLSSILRRFILDPSNRAKIVYAYQNEDFFLDVNIPEEMPEDEVPQETQKQKEQR
EESNKLSFEEMSENVRELVKKDLRKCAGMPLAHDVVKAFFKILTTPTIKNVDGVGLDVYK
AMDELFGRKEVNIIDKHVHSGNLSVKFEVYLKKLYYMLHGSEIQPTEEGKNVTLANCIFA
FPCLKNLRWSTKETEHKLSGYLDIIRNNRNTSDGNGAHSSYLLTEEQLDENIKAFVTLYF
YVTGMCYNELKARYDI
NT seq 3831 nt   +upstreamnt  +downstreamnt
atgccagtagatgttttgattcgtccgttcctgaaggaacttgattttgagaaggctctt
gcagacttcctgccacaacatggttgggagcctcttgtaattatgaacccaacagaggat
attctcattaagaactgggctgctatcatattcaataataatcgtgacatgaatcgtctt
ggtgacttcaaactcaccgacacagagatgcagcagatcatgacacaagtggacgcattg
aagaacccatacgaggtgaaccagttcatcaatggtgggcaggtgatgataaagcgtgac
aatccagatgacaaaatcaacttcggcaaggaggtgtatctcactatcttcaatgctcgt
gagattcatgcaggacagagtgtttatcagattgttcgtcagccaagattccaaaccaag
catcctctaggcactacacgacgtggcgatgtggtgttgctcattaacggtatgcctgtt
atacatatcgaattgaagcgaagtggtgtggatgtaactcaggcagtgaatcagataaag
aagtatgcccacgaaggcatcttctcgcatggtatcttctctttgatacaaatatttgta
gccatgactccagagaagacactctatttcgcgaatcctggggcgtcggaaaatttctct
ccaagtttctacttccactgggctgacttcaataacgatgaggtttacgactggaagcgc
attgccgccaaccttctgtcaatcccgatggctcaccagatggtgggctactataccata
gctgatgacaaggacgaaacgttgaaagtgcttcgcagttatcagtatttcgcaaccacc
aagatatgggagcgtgtgcgtgcgaccaactgggatgaccactatcataagggtggttac
atctggcatactacaggttctggaaaaacgatgacttctttcaagtctgcccagctcatt
gccaaggccaatgatgccgataaggtggtgttcctgctcgaccgcatcgaactgagcaca
cagtcggctgacgagtatcgtggctttgccaatgccgatgataacgtgctcgatacggat
gatacaaggaatctgatacgagtattggaaagcgacagcaaggacgagtgccttattgtg
acctctatacaaaagatgagtcgtatcaatagcgacaacagcgttccgcagtcaaccatt
gacaagattaacaagaagcgtatcgtattcattgttgatgaatgtcacagaagcgtgaca
ggttcaggcaaggaaagcggtagtggcatgctcttgacaataaaaaacaccttccctcgt
gccgtcctcttcggattcacaggtacaccgatatttccagagaatgctcgtggcgagatg
actacagaggttatttttggcgatatgctccacaaatacacgcttgccagtggtattcct
gacaagaacgtccttggtttcgacctttatcgagaagacacattccaagagcacgacatc
cgcgaaaaggtggcattgcgacaggcagaccctgatgcagagacggcggatgacatcgca
aaggacaatgagaagatggacatctataacaagtggatgtgtgacactgatatgttgaaa
gtggaagatgaagcgaaatcgctctacgccactgatgcacaccacatggcggttgttcag
aaaattgtggaggaacgccctatgctcagccacaatggtaagtttcatgccatattggcc
acaaagaacattccagaggccatagaatactatcagctattcaagaagcattatccagag
tacaatgttactgccatctttgatgactccatcgataataatggcggtggagaatataag
gaagaggctatccttgaaatacttcaggattacaatgataggtttgataccacattccag
caatcaacctatgccaaatacaaaaaagacgtagcaaaacgtcttgctcacaaggcacct
tatcagcacttagagaaagacaagcaactggatttgctcatcgtagtaacccagatgttg
accggatatgactcgaaatgggtgaacacactttatgtggacaaactgttgcagtatgtg
gatgttatccaggcattctcacgcaccaaccgcctgtttgggccagataaaccttttggt
attatcaagtatttcacacgtcctaaccgtatggcgaagaacattgaggatgcgctggct
ctgtatgtagatcagccattacttgtattcacagataagctggaggccaatctggagaag
attaaccagtcgttccgcgtcatcgaccaactgtttaaggcagaaggaatcgattactat
gctaccttaccccaggcagaagcatcaaaaaagaagtttgccaaagagttttgtgaaatg
accaagcgtctggaagctgccaagatgcaaggtttccaatgggaacaatctgaatacgag
ttccaacataccaatggatgggtgaaactgaagaaggaacttgacgaacagacttacaag
attcttctggctcgttaccgcgaactattccagaaaggacctggaggcgatggtgacgac
gatgatgtctatcagctggaagcatacatcacagagactggtgtcggtacaatcgatgct
gagtatatcaactccaagtttattaagttcgtcaagaacctctatacttctggtccaggt
agcgaacatgtcaaggttgcgcaggcagaacttcataatgcttttgcctcactcaatcag
cgcgaccagcgtactgcccagcgcattttgcatgatatagaaagtggtgacttgcgtcta
agcccaggcaagaccatctatgattatatcattgactaccagaagcgtgagtgtgatcaa
caagtttatacgttggccgaagcaacggggttgaacatcaccaaactgcaggaactcatc
agtaaagatacaacagagcaaaacatcaatgaacaaggtcgtttcgatactttggtgcag
acgcttgataaggtgaaggctgtcggtttcctgaagagagttatcgggcaggatgtaccc
aagcgttttgtcatcaccaacctgtcaagcatcctccgtcgcttcatcctcgatccctct
aacagagcaaagattgtctatgcctatcagaatgaagatttcttcctggacgtaaatatt
ccagaggaaatgccagaagatgaagtgccgcaagaaactcaaaagcagaaggaacagcgt
gaggagagtaataagctgtcctttgaggaaatgagcgaaaatgtacgtgagttagtcaaa
aaggatttgagaaagtgcgcaggtatgccactggcacatgatgttgttaaagcgttcttt
aagattcttacaaccccaacaatcaagaatgttgacggcgttggtcttgatgtctataag
gcaatggacgaactcttcggtagaaaggaagtgaacatcattgataaacacgtccattct
ggtaacctatcggttaagtttgaggtttacttgaaaaagctgtactatatgcttcacggc
agcgagattcaaccaacagaggaaggaaagaatgtcactcttgccaattgtatctttgcg
ttcccatgtttgaaaaatctacgttggagcaccaaagaaacagaacacaaactttctggt
tacctcgatataattcgaaacaatcgcaacacgtctgacggaaatggcgcccattcttca
tacttgctgacggaggaacagcttgacgagaatatcaaggcattcgttacgctgtatttc
tatgtaacaggaatgtgctataatgaattgaaggccaggtatgacatctga

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