Prevotella nigrescens: J5A59_05970
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Entry
J5A59_05970 CDS
T07424
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
pni
Prevotella nigrescens
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pni03032
]
J5A59_05970 (gyrB)
03400 DNA repair and recombination proteins [BR:
pni03400
]
J5A59_05970 (gyrB)
Enzymes [BR:
pni01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
J5A59_05970 (gyrB)
DNA replication proteins [BR:
pni03032
]
Prokaryotic type
DNA Topoisomerases
J5A59_05970 (gyrB)
DNA repair and recombination proteins [BR:
pni03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
J5A59_05970 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TPR_EMC2
ivWA
Motif
Other DBs
NCBI-ProteinID:
QUB52620
LinkDB
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Position
1:complement(792827..794797)
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AA seq
656 aa
AA seq
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MVDNLENENNYSASNIQVLEGLEAVRKRPAMYIGDISEKGLHHLINETVDNSIDEAMAGY
CSHIEVTINEDNSVTVEDDGRGIPVDEHEKLHKSALEVVMTVLHAGGKFDKGSYKVSGGL
HGVGVSCVNALSSHMKSQVFRNGKIYQQEYEQGKPLYPVKVVGETDKTGTRQQFWPDGSI
FTTTIFQWDIVARRMRELAFLNAGIKITLTDLRPNTEGKTRQEVFHAKDGLKEFVRYVDR
HRTHLFDDVIYLKTEKQGIPIEVAIMYNTDYNENIHSYVNNINTIEGGTHLTGFRTALTR
TLKAYADNDPQIAKQIEKAKIEITGEDFREGLTAVISIKVAEPQFEGQTKTKLGNSEVSG
AVQQAVGEALSYYLEENPAEAKLICDKVILAATARIAARKARESVQRKNVMTGGGLPGKL
ADCSNKDPKDCEIFLVEGDSAGGSAKQGRDRYTQAILPLRGKILNVEKVQRHRVFEAESV
MNIIQSIGVRFGVEGESDFEANTEKLRYDKIIIMTDADVDGSHIDTLIMTLFYRYMPRVI
EEGHLYIATPPLYKCTYKKVSEYCYTEQQRLQFLDKYAGGDEENKAVHTQRYKGLGEMNP
EQLWETTMDPKTRLLKQVTIENASTADEMFSMLMGDDVEPRREFIEQNATYANIDA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggtagataacttagaaaacgagaacaactactcggccagtaatattcaggtccttgaa
gggcttgaggcagtgcgtaagcgtcctgcaatgtatattggagatataagcgaaaaagga
cttcatcacctcataaacgagacagtagataactctattgatgaagcaatggctggctat
tgtagccatatcgaagtaaccatcaacgaggataattctgtaacagtagaagatgatgga
cgtggaattcctgtggacgaacacgagaaattgcataaaagtgcgctcgaagtcgttatg
acagtgctgcacgctggtggaaagttcgataagggttcctataaagttagtggtggtcta
catggtgtaggtgttagttgtgtaaatgcgctatcttctcacatgaagtcgcaggtattc
cggaatggaaagatttaccagcaagaatacgaacagggaaagcctctctatccagtaaaa
gtggttggtgaaaccgataagactggtacgcgtcagcagttctggcccgatggcagtatt
tttactacaaccatatttcagtgggatatagttgcacgtcgtatgcgtgaacttgctttc
ttaaatgcaggtataaagattacactaaccgatttgcgtcccaataccgaaggcaaaaca
cgccaggaagttttccatgccaaagatgggttaaaagaatttgtaagatacgtagaccga
catcgtactcatcttttcgatgatgtgatatacttgaagactgaaaagcaaggcattcca
atcgaggttgccataatgtataacaccgattataacgaaaacatacactcgtatgtcaac
aacattaataccatagaaggaggaacgcatctcacaggattccgtacggcattgacacgc
acattgaaggcatatgccgataatgatccacaaatagcaaaacaaatagaaaaggctaaa
atagaaataacgggagaggacttccgcgaaggactgacagcagttatttctattaaggta
gccgagccacaattcgaaggacaaactaagacaaagctgggaaatagcgaagtttctggt
gctgttcagcaagctgtaggcgaggctctctcttactatttagaggaaaatcctgctgaa
gctaaacttatttgcgataaggttattttggcggcaacagctcgtattgcagcccgcaaa
gcacgcgaaagtgttcagcgcaagaacgtgatgacgggaggcggattgccaggaaaactt
gccgattgctctaataaagatcccaaagactgcgaaatattccttgtggagggcgattct
gctggtggttctgccaaacaaggtcgcgaccgatatacacaagccattctgcctttgcga
ggaaaaatacttaatgtagagaaagttcaacgtcatagagtgttcgaagctgaatcggtt
atgaatatcattcagtcaataggcgttcgtttcggagtggaaggagagtctgactttgaa
gctaataccgagaagctgcgttacgataagattattataatgaccgatgccgatgtcgat
ggctctcacatcgataccctcattatgacactcttctatcgttatatgccccgtgtaatc
gaagaaggacatctatatattgccactcctccgctttacaagtgtacttataaaaaggtg
agcgagtattgctacacagagcaacaacgattgcaattccttgacaagtatgccgggggg
gacgaagagaacaaggctgtccacacacaacgatacaaaggtttgggagaaatgaacccg
gaacagctttgggaaacaacaatggaccctaagacacgcttactgaagcaagtaacaatt
gagaatgcatcaactgccgatgaaatgttctcaatgttgatgggagacgatgttgaaccg
cgtcgtgaattcatagaacagaatgcaacctatgcaaacatcgatgcatag
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