Prevotella nigrescens: J5A59_06025
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Entry
J5A59_06025 CDS
T07424
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
pni
Prevotella nigrescens
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pni02000
]
J5A59_06025
Transporters [BR:
pni02000
]
Other transporters
Pores ion channels [TC:
1
]
J5A59_06025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
CarboxypepD_reg
OMP_b-brl_3
TTR_TEN1-4
CetZ_C
Motif
Other DBs
NCBI-ProteinID:
QUB52870
LinkDB
All DBs
Position
1:complement(805703..808786)
Genome browser
AA seq
1027 aa
AA seq
DB search
MKQVKCKISVRILTLIVGLFLSVSAFAQSTIKGIVKDSSGEPIISASVLITGTHDGVQTD
LDGNFELNVAPGTQLTISYIGYIKQQVAAKNGMVVVLQPEDAQQMQEVVVIGYGSVKKSD
LTGSVLAMKPDSKNKGLVVNAQDMMQGKMAGVNVTGEGGIPGGGAKIRIRGGSSLNASND
PLIVIDGVALDNTGIKGMSNPLSMVNPQDIESFNVLKDASATAIYGSRGSNGVIIITTKK
GHVNQPLAVSYAGSVTASVKRKTIDVMNGDEYRKFITDMFGAGSKQVAALGKANTNWQNE
IYRTAWAQDHNITVTGSVGDKANSMPFRVSAGYTNNQGIVKTSSFERYTAAVNLSPSLLN
NHLNMNLNVKGMFAKNRFADGAAIGAAVSFDPTQSVYDYTSADAANFGNYFEWRGIGLAP
SEDPTWPTTLNTLATKNPVAILNLKNDRSRSRDVIANAEFDYKVHGFEDLRLHVTAGADI
AQGQQDTDIAPTSPLASYYGYNGWSRQLKRNLTFNTYAQYYHDFKDAAKNHFDIMAGYEW
QHFWKKDKSRAIQYYPSTNSKAGQVYKDSGKDYNRDGILEDYVYPTENYLVSFFGRSNWS
LMDRYYVTATFRADGASRFKKHWAYFPSFAFAWKVKDENKFRDIKWLSDLKLRLGWGMTG
QQEGIGDYNYFDIYQTGSGSNNFYPITDDGTVVRPQAVNKDLTWETTTTYNVGLDWGILN
QRLTGSVDWYYRKTTDLLNNSVTVSAGSNFRNQVPSNIGSLKNTGVEVALRWRAIETKDW
YWTIDYNFTYNKNEITDLTGGKDPNFVVATGGISAGIGGNAQAHAVGHPASSFYVYQQIY
DKNGKPIEGAVVDRNGDGQITPADKYFYKSPMAPVTMGLASRLEYKNWDFGFSLRANIGN
YVFNDLMAGQANVSPAAVWASSEFLSNRPIESIKDNWQTGNDKTVLSDRWVQNASFLKLD
NITLGYSFADLFKTGGWHGLSGRVYGTASNILTLTKYKGIDPEVFGGIDNNPYPRPMSFI
VGLNLNF
NT seq
3084 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaggtaaaatgcaaaatctctgtcaggatactgacgcttatcgtcggtctattc
ctgtctgtcagtgcctttgcacaatcaacaatcaaaggtattgtgaaagattcttccggc
gaaccaatcattagcgcatcggttcttatcacaggaacccacgacggtgtgcagactgac
ctcgacggaaactttgaattgaatgtagcaccaggcactcaattaaccatttcctacatc
ggttacattaagcaacaagtagctgcaaagaacggtatggtagttgttctgcagccagaa
gatgcacaacagatgcaagaagtagttgtcatcggttacggttctgtgaagaagagcgac
cttacaggctcggttctcgcaatgaaaccagactcaaagaacaaaggtctcgttgtaaac
gcacaggacatgatgcaaggcaagatggctggtgtgaatgtaacgggcgagggcggtatc
cctggcggcggtgcaaaaattcgtattcgtggtggttcttcgctgaacgcatctaacgat
ccgcttatcgttattgatggtgtggcattggataacacgggtataaaaggtatgtcgaac
ccactctctatggtaaacccacaagacattgaaagcttcaacgtcttgaaagatgcttct
gcaacagctatttacggctctcgtggttctaacggtgttatcatcatcaccacaaagaaa
ggacatgtcaatcaaccgctcgcagtttcatacgccggtagcgtaactgcaagcgtcaag
agaaagaccattgacgtgatgaatggcgacgagtatagaaagtttattaccgatatgttt
ggtgcaggaagcaagcaagtggctgcacttggcaaggctaacaccaattggcagaatgaa
atttatcgcacggcatgggcacaagaccacaacataaccgttactggttctgttggcgac
aaggctaattctatgcctttccgtgtttctgcaggttacacaaacaatcaaggtattgtg
aaaacctcaagctttgaacgttacacagcagccgtaaacctaagcccatcgctcttgaac
aatcacctgaacatgaatttgaatgtgaaaggaatgtttgcaaagaaccgttttgctgat
ggtgctgcaatcggtgctgccgtatctttcgacccaactcaaagtgtttacgactataca
tcggctgatgccgctaactttggcaactactttgaatggcgtggcataggtctcgccccg
agcgaagacccaacatggccaactactttgaatactttggcaacaaagaaccctgtagct
atattgaatttgaagaacgaccgctctcgcagccgcgacgtaattgcaaatgcagaattt
gactataaagtccacggatttgaagatttgcgcctgcatgttactgccggtgccgacatt
gcacaaggacagcaggacacagacattgcacctacttctccattagcatcttattatggg
tacaatggctggagcagacagttgaagcgcaatctcactttcaacacttacgcacagtat
tatcacgactttaaggacgctgcaaagaaccacttcgatattatggcaggttacgagtgg
caacacttctggaaaaaagacaagagccgcgctatacaatactatccttctaccaactca
aaggcaggacaggtttataaagacagtggtaaagactacaaccgcgatggcattttggaa
gattatgtatatcctacagaaaactatcttgtatcattcttcggtcgttcaaactggagt
ttgatggatcgttactatgttactgcaaccttccgtgcagatggtgcatcacgtttcaaa
aagcattgggcttacttcccttcattcgcctttgcttggaaagtaaaggacgaaaacaaa
ttccgcgacattaaatggttgagcgacttgaaactccgcttaggttggggtatgacaggt
cagcaggaaggtatcggcgactacaactacttcgacatttatcagacaggtagcggttca
aacaacttttatccaataacagacgacggaactgtagttcgtccacaagctgtaaataaa
gatttaacttgggaaacaaccacaacttacaacgttggtctcgactggggtatcctcaac
caacgcctcactggtagcgttgactggtactaccgtaagaccacagacctcttgaataac
agtgtaactgtttctgccggttccaacttccgcaaccaagttccttctaatatcggttcg
ttaaagaataccggtgttgaagttgccttgcgctggagagctattgagaccaaggattgg
tattggactattgactataacttcacatataacaagaacgaaattaccgaccttacaggt
ggtaaggatcctaactttgttgttgcaacaggaggaatatcagcaggtattggcggcaat
gcacaggcacacgctgtagggcacccagcttcttctttctacgtttatcagcaaatttat
gataagaatggcaaaccaatcgaaggagcagttgtagacagaaacggtgatggacaaatt
acccctgccgacaagtacttctacaagagtccgatggctcctgttacaatgggacttgct
tctcgtttagagtataagaactgggacttcggtttctctctccgtgcaaatatcggcaac
tacgtgttcaacgatttgatggctggacaagctaatgtttctcctgctgctgtatgggca
tcatctgaattcttgtcaaaccgtccaatagaatcaattaaagacaattggcaaacaggt
aatgataaaactgttctttcagaccgttgggtacagaatgcctcattcttgaaactcgat
aacattacattgggttatagctttgccgacctcttcaagactggtggctggcatggtttg
agcggacgcgtgtatggtactgcttctaacattctcacccttactaaatataaaggtata
gaccctgaagtattcggcggtatcgacaacaatccctatcctcgcccaatgtcattcatt
gtaggtcttaatctaaacttctaa
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