Prevotella nigrescens: J5A59_06225
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Entry
J5A59_06225 CDS
T07424
Name
(GenBank) substrate-binding domain-containing protein
Organism
pni
Prevotella nigrescens
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
HATPase_c
Response_reg
HTH_18
HTH_AraC
HisKA
Peripla_BP_1
HATPase_c_2
HATPase_c_3
HATPase_c_5
Mga
DUF2062
Peripla_BP_3
HTH_29
HTH_8
Motif
Other DBs
NCBI-ProteinID:
QUB52669
LinkDB
All DBs
Position
1:871670..874318
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AA seq
882 aa
AA seq
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MYRKVYIVVCFVGLLLLVGCNKTTKKYVVGVSQCSEDIWRSKLNDELLMGTYDHKDVELL
FASAKDNDKLQTEQIEKFIQRGVDLLIISPNQVHSITPVIDKAYDKGIPIILFDRKTDSQ
KYTAFIGADNVKVGKAIGEFIAKTLRGKGKVIEIKGLDKSSPAIDRHKGFVQALSKYPNI
QLKRTLSGEWTTESGYRSMKNAIADAKDCNIVWGQNDRMAEGAQRAMAEAGIHNVQYVGT
DALPSKGGGIEAVDAGKLLASYIYPTRGDMVMQLAMKILKKQPFHRDNYLKGALVTKDNA
KVLLLQNEEMMKQRSRLSDLNNKVDTYLAQYNHQKIYMLLGGVIIALLIGLIVYIYRTII
LRRQLEEEATNAKLQFFTNVSHELRTPLTLIADPIEHIVNDENLTKRQRNMLQIVEKNVS
ILMRLVNEILDFRKIQNKKMKLTLSEFELTGYLKEWVSTFESIATKRKIKVDLIILAPIR
LCADIYKVERIFYNLLSNALKYTDEGGNITIKAKSTDETVEICVKDTGRGIAKEDIRHIF
DRFYQVRNSNKDGTGIGLAIVKAFTELQGGTAKVESEVGEGSEFTITLPKRVAGDNFQPA
DESYTMNDFLDESSAVTDISTENKVSKITSDRQEDKPRVLVIDDNADIRAYATTLLSDEY
DVMEASDGAEGLRKAVREVPDVVVCDVMMSGMDGLECCKRLKADSLTCHIPVILLTAKTL
DEYRAEGYAYGADAYLTKPFNGNVLKARIKNLIANRKLLKIVFGNDAQQVPTVPVAQSAE
SQFVEKFRTIIQANLGNSELNVETISHEMGISRAQLYRKIKSITGISPNDIVREARMRRA
DRLLETTDKSVSEIAYEVGFSSPSYFTKCYREFFGRTPNKKH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaaaggtttacatagttgtgtgttttgtgggattactactgcttgtggggtgt
aataaaaccacaaaaaagtatgttgttggtgtgtcgcaatgctctgaagatatatggcgc
agcaagctgaatgatgagctattgatgggaacttacgaccataaagacgtcgaattgctg
tttgcttcggcaaaagacaacgacaaactgcaaaccgaacaaatagaaaagtttatacaa
cgaggcgtagatctgctcattatatcgcccaatcaggtgcactccataacccctgtgata
gacaaggcctacgataagggaatacctataatactgtttgaccgaaaaaccgactcgcag
aagtacactgcctttataggtgcagacaatgtaaaggtgggaaaagcaattggcgaattt
attgcaaagacgctgcgcggcaaaggaaaggtgatagaaattaaaggattagacaagtct
tcgcctgccatagaccgccacaaaggttttgttcaggcattaagcaaataccccaacatt
cagttgaaacgtaccctttccggtgaatggacaacggaatcgggctatagaagcatgaaa
aatgcaattgcagatgccaaggactgcaatattgtatggggacaaaacgaccgtatggca
gagggtgcacagcgtgctatggcggaagcgggcatacataacgtacagtatgtaggaacc
gatgcgctgccaagcaagggtggtggaatagaagctgtggacgctggcaaattgcttgca
tcgtatatctatcccactcgtggcgatatggtgatgcaattggcaatgaaaattctgaaa
aaacaaccatttcatcgggataattacctcaaaggagcattggtaacgaaagacaatgcc
aaggtgttgctactgcaaaacgaggagatgatgaagcagcgaagcagactttctgacctg
aataacaaggtagacacctaccttgcacaatacaatcaccagaaaatatatatgcttttg
ggtggtgttatcattgcgttgctcatcggacttatcgtttacatttatcgtaccattatt
cttcgtcgccagttagaagaggaagcaaccaacgcaaagttgcaattctttaccaatgtc
agccacgaactgcgcacgccattgacactaattgccgacccaatagagcatatcgtaaac
gacgagaacttaacgaaacggcagcgcaatatgttgcagattgtagaaaagaatgtttcc
attctgatgcgccttgtaaacgaaatccttgacttcagaaagatacagaacaagaagatg
aaactgacgctgagcgagtttgaactgacgggctatctaaaagagtgggtgagcacgttc
gagtctattgcaacgaaacggaagataaaagtagacttgataatccttgcacccattcgt
ctatgtgccgatatatataaggtagaacgcattttctataacttgttgagcaatgcctta
aagtatactgacgagggaggaaacatcacaataaaggcgaaaagcaccgatgaaaccgta
gaaatttgcgtcaaagatacaggcagggggattgcaaaggaagatataagacacatattc
gacagattttaccaagtaagaaacagcaacaaagatggtacgggcataggtttggcaatt
gtaaaggcatttaccgaactgcaaggaggcaccgcaaaggtggaaagcgaagtgggagag
ggtagtgaatttacgataacattacccaaacgtgtggcaggcgacaatttccaacctgct
gacgagtcgtacacaatgaacgatttcttggacgaaagttcagccgtaaccgatatttca
accgaaaacaaagtgtcgaaaataacttccgaccgtcaggaagacaagcctcgtgtgctt
gttatcgacgataatgcagacattcgcgcgtacgcaacgacgctgttaagcgacgaatac
gatgtgatggaagcgtctgacggagcggaaggacttagaaaggcagtcagggaagtgccc
gatgtcgttgtttgcgatgtcatgatgtcgggaatggacggcttggaatgttgcaaacgc
ttgaaagccgacagtttgacgtgccatattcctgtgattttgcttaccgccaagacatta
gacgaatatcgtgcagaaggctatgcgtatggtgccgacgcctatctgaccaaacctttc
aacggaaatgtactgaaagcgcgtataaaaaacttgattgccaatcggaaacttctgaag
attgtgtttggaaacgatgcgcagcaagtgccgacagtgccagttgcacagagtgcagaa
agccagtttgtagagaagttccgcaccataatacaagccaatctcggtaactctgaattg
aatgtagagactatcagccacgagatgggtatcagcagggcgcagctgtataggaaaata
aagtcgataacaggcatttcgcccaacgacatagtacgcgaagcacgtatgagacgtgcc
gaccgcttactggagactaccgacaaatcagtttcagaaatagcttacgaggtgggtttc
tcctcaccgtcgtacttcacaaagtgctatcgagagttctttggccgcacgcccaacaaa
aaacattaa
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