Prevotella nigrescens: J5A59_06855
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Entry
J5A59_06855 CDS
T07424
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pni
Prevotella nigrescens
Pathway
pni00550
Peptidoglycan biosynthesis
pni01100
Metabolic pathways
pni01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
J5A59_06855 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
J5A59_06855 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pni01011
]
J5A59_06855 (mrdA)
Enzymes [BR:
pni01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
J5A59_06855 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pni01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
J5A59_06855 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QUB52786
LinkDB
All DBs
Position
1:1035977..1038130
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AA seq
717 aa
AA seq
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MINYDLEKRRFILSGVAIAIITVYLIRLFALQIASDDYRKRADSNAFLKKIEFPSRGIIT
DRKGKLLVYNQPAYDIMVVMNEEKGRLDTLEFCKALNITKDFFVQRMKDIKDRTKNPGYS
RFTQQLFMGQLSDKEFSSFQEKLYRFPGFYIQKRSIRQYSGTIAGHVLGDVAEVSQSDIE
TDDYYQPGDYIGKMGIERKYEKELRGQKGVQILLRDAHGRIKGRYKDGQYDQRPKPGSDL
QLGLDADLQALGERLMEGKIGAIVAIEPKTGQILAMVSSPTFDPREMIGKMRGKNQQRMT
LDPSKPLLNRAIMGQYPPGSTFKTSQAITYFSEGIVSDSTRFPCHHGFSFRGLHVGCHAH
ASPISIVPAISTSCNAYFCWGLYYMLSNRRKYKNLDDAMNRWRDYMVSMGFGYKLGIDLP
GEKRGLIPNAEFYDNAFGKWNPLSVISIAIGQGEINLTPLQIANLGAIIANRGYYYTPHV
VRKIQGAQLDRKYLKMHKVMGTPRAFNEVVAGMVSSARGGTCAHAVHPGYTLAGKTGTAQ
NRGKDHSVFMGFAPVESPKIAIAVYVENGGFGAVYGVPIGSLMMEQYINGKLTPHDETQA
TSIQRRHISYPFKRKLSISDSLRLDSIKRVNHIKDSLRIVRERQNIEAKQRARQLKAERD
AEEKEKKQQPLSDPIIKDDEEIKIRTEKEEKNKGKERDKPNSGKKKDKENRRNDDKK
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgattaactatgatttagagaaacgccgttttattcttagtggtgttgctattgctatc
atcactgtttatttaatacgattatttgcactccagatagcaagtgacgactatcgcaaa
cgtgccgattctaatgcttttttaaagaaaatagaatttccttcccgaggtataattact
gacagaaagggaaaacttctcgtttataaccagcctgcgtatgatattatggtggtaatg
aacgaagaaaaaggtcgtcttgatactttagaattttgtaaagctttaaatattacgaag
gatttctttgttcaacgtatgaaagatataaaggatagaacaaagaatccaggttattct
cgttttacccagcaactctttatggggcaattaagcgataaagagtttagttctttccaa
gagaaactttatcgtttccctggtttttatatacaaaagcgcagtattcgccaatacagc
gggacaatcgcaggacatgttctgggagatgtggcagaggtgagtcaaagtgatattgaa
actgatgattattaccaaccaggcgattatatcggtaaaatgggaattgaacgcaaatac
gagaaagaactacgtggacagaaaggagtgcaaattcttcttcgtgatgctcatgggcgt
attaaaggaaggtataaagatggtcaatacgaccagcgacctaagccgggaagtgatttg
caattaggtcttgatgccgatttgcaagctcttggtgaacgtttgatggaaggaaaaata
ggagcgattgtagccattgagcctaagaccggtcagatattagcaatggtttcctcgcca
actttcgatcctcgtgaaatgatagggaagatgcgtgggaagaatcaacagcgaatgaca
ctcgatccctctaaacctttacttaatagagctataatgggacaatatcctcctggctct
acttttaagacaagtcaggcaattacttatttcagcgaaggaattgtgagcgattctact
cgttttccatgtcatcatggtttttcttttcgtggtcttcatgtaggctgtcatgcacat
gcttcgcctatttctattgtaccggcaataagtacttcgtgtaatgcttatttttgttgg
gggctatattatatgctttctaacaggagaaagtataagaatcttgacgatgcaatgaac
cgatggcgcgattatatggtgtcaatgggatttggttataaattggggatcgacttgcca
ggagagaagcgaggacttattccgaatgcagaattttacgataatgcttttgggaaatgg
aatccattatcggtcatttcaattgctatagggcagggagaaattaatctgactccattg
caaattgcaaatcttggtgctattattgcaaatcgtggatactactatactccacatgtt
gtacggaagattcaaggagcacaattagaccggaaatatttaaagatgcataaagtaatg
ggaacgccacgggcttttaacgaagtggttgcaggaatggtctcatctgcacgtggtggt
acctgtgcccatgccgtacatcctggatatacacttgcaggaaagacgggtactgcacaa
aatcgcggtaaggatcactccgtgtttatgggatttgctcctgtggaatctcccaagatt
gcaattgccgtgtatgtagagaatggtggattcggggcagtctatggtgtccctatcggc
tctctgatgatggagcaatatataaatgggaagttgactcctcacgatgaaactcaggct
acatcgatacaaaggcgtcatatcagctatccttttaaacgtaagttgagtatttcggat
tctttgcggttagattcgataaagcgtgtaaatcatataaaggattctttgcgcatcgtt
cgcgagcggcagaatattgaggcgaagcaacgtgcccgtcagttgaaggcagaacgagat
gcggaagagaaagaaaagaagcagcaaccgttgagcgaccccattataaaggacgacgag
gagataaaaataaggactgaaaaggaagagaagaataaaggaaaagagagggacaaaccc
aatagcgggaagaaaaaagacaaagaaaatcgtaggaatgacgacaagaaatag
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