Prevotella nigrescens: J5A59_07090
Help
Entry
J5A59_07090 CDS
T07424
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pni
Prevotella nigrescens
Pathway
pni02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
J5A59_07090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pni03021
]
J5A59_07090
Transcription machinery [BR:
pni03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
J5A59_07090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
SBE2_C
Histone_HNS_N
Motif
Other DBs
NCBI-ProteinID:
QUB52828
LinkDB
All DBs
Position
1:complement(1094821..1095684)
Genome browser
AA seq
287 aa
AA seq
DB search
MRQLKITQSITNRESTALEKYLQDISHEGLVSVEEEIELARKIKKGDVKALEKLTKANLR
FVVSVAKQYQNQGLSLPDLINEGNLGLIKAAKKYDETRGFKFISYAVWWIRQSIMQAISE
QSRIVRVPINQMGVMHKMRKVVQQFEQEYQRLPSIDEIAEQIDLPKEKIVEIMSMITKKI
SMDAPISTNDDGNLLDVLPNKNSPSADEDLLEEGLKKEIERLLVSLSEREQIILRGYFGI
NQREMSLEEIGEQTGLTRERVRQLKEKAIKRLRCNAIGDSLKGYLGK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagacaactgaaaatcactcaatcgattacaaatcgagaaagtacggcactcgagaaa
taccttcaagatataagtcatgaaggtcttgtgagtgtagaagaagagatagaattagca
cggaagataaagaaaggcgatgtaaaagctctcgaaaaactaacgaaagccaacttgcgt
tttgttgtttctgttgcaaagcagtatcagaaccaaggattgtcgctccctgatttaatc
aatgaaggaaatctcggactgataaaagctgcgaaaaagtatgacgagacacgagggttt
aagtttatctcgtatgcagtgtggtggattagacaaagtataatgcaagccatttccgaa
caaagtagaatagttagggtaccaataaaccaaatgggcgtgatgcataaaatgcgtaaa
gttgtgcaacaattcgagcaagagtatcaacgtttacccagcatcgacgagatagcggaa
caaatagatttgccaaaagagaagatagtagaaataatgtctatgataacgaaaaaaata
tctatggacgctccaatctctacgaacgacgatggaaatctacttgatgtattaccgaac
aaaaactctccgtctgccgatgaagatttattggaagaaggattaaaaaaagaaatagag
cgactattggtgtcactttcagaacgtgaacaaattattctaagaggatattttggtatt
aaccaacgagagatgtcgctcgaagaaattggagaacaaactggactgacacgcgaacgt
gtcagacaattaaaggaaaaggctataaagcgtctgcgctgcaatgcaataggagactca
ttaaaaggatatttaggaaaataa
DBGET
integrated database retrieval system
