Prevotella nigrescens: J5A59_09420
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Entry
J5A59_09420 CDS
T07424
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pni
Prevotella nigrescens
Pathway
pni03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
J5A59_09420 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pni03400
]
J5A59_09420 (uvrB)
DNA repair and recombination proteins [BR:
pni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
J5A59_09420 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
J5A59_09420 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
Kinesin
Microtub_bd
DUF6990
AAA_5
SWI2_SNF2
AAA_22
AAA_7
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QUB51543
LinkDB
All DBs
Position
1:1630221..1632260
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AA seq
679 aa
AA seq
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MDFKLTSKYKPTGDQPEAIKELTEGLKRGDKSQVLLGVTGSGKTFTMANVIANVNKPTLI
LSHNKTLAAQLFEEMKDFFPQNAVEYYVSYYDYYQPEAYMPSTDTYIEKDLAINDEIDKL
RLSAVSALLSGRKDVIVVSSVSCIYGMGGPVAMRNNVIKIKKGEILDRNIFLRRLVDALY
VRNDIDLQRGNFRVKGDTVDIAMAYSDNILRVTWWDDEIDAIEEVDSISYHRLGTFDEYE
IYPANLFVTSKEQTEIAIRQIQDDLVKQIDFFNESGDSIKAQRIKERVEYDIEMMKELGH
CSGIENYSRYFDGREAGQRPYCLLDFFPKDNLIIIDESHVSVPQISAMYGGDRARKRNLV
EFGFRLPAAFDNRPLKFEEFHNLIHQVIYVSATPANFELKESEGVIVEQVIRPTGLLDPE
IEVRPSTNQIDDLMEEILKRAEKYERILVTTLTKRMAEELTEYLLNHDIKAAYIHSNVVN
LDRIKIINDLRSGVYDVLVGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTAGRA
ARNVNGKVIMYADSITESMQKTIDETLRRREKQLEYNAQHHITPTQIKRSIKEILPTKNI
SMGTNIANEKIKLQKYDIPSEELSMVADPIIMKMTKVQLEKSIQNTTALMKEAAKNLDFL
QAAQYRDEILRLQAELEQK
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggactttaaactaacatcaaaatacaaacctactggtgatcaaccagaggctataaaa
gaattaacggaaggactaaaacgcggcgataaaagtcaagtcttattgggggtaactggt
tctggaaaaactttcaccatggcaaatgttattgcgaatgtgaacaagcccacccttatt
ttatcgcacaacaagactctggctgcccaactctttgaggaaatgaaggatttctttcct
caaaacgcagttgagtattatgtttcatactacgattattatcagccagaagcttatatg
ccttctacagatacatatatagaaaaggacttagccatcaatgatgaaattgacaaactt
cgtctttctgcagtttcggcattgttatcaggcagaaaagatgtaattgtagtgtcttcg
gtttcttgtatctatggcatgggaggtcccgttgctatgcgtaataatgttataaagata
aaaaagggagaaattctcgaccgtaacattttcttgcgccgtttggtagatgccctgtat
gttaggaatgatattgatttacagcgaggaaatttccgagtaaaaggcgatacagttgat
atagcaatggcttatagcgacaatatattaagggttacctggtgggacgatgaaatagac
gcaatagaagaagtagattctatttcttatcaccgtttgggaactttcgatgagtatgag
atttatccagccaacctttttgtaacttcaaaagaacaaacagaaattgctattagacaa
atacaagatgatttagtaaagcaaattgatttctttaatgaatctggcgatagtattaag
gctcaacgtattaaagaacgtgtagaatatgacattgaaatgatgaaagaattaggccat
tgttcgggaattgaaaattattctcgttattttgatggcagagaagctggacaacgtcct
tattgtttgctggacttcttccctaaagataatcttattatcattgatgaaagccatgtc
agtgttcctcaaatatctgcaatgtatggtggcgatagagcacggaaaagaaacttggtt
gaatttggttttcgtttacctgcagcatttgataaccgtccgttgaagttcgaagaattt
cacaatcttattcaccaagtaatttacgtatcagctactcctgccaatttcgaactaaaa
gaatctgagggtgttattgttgagcaagtcattcgcccgacaggattgctcgatccagaa
atagaagttcgtccatcaacaaatcaaattgatgatttaatggaggaaattttgaaaaga
gcagaaaaatatgaacgtattcttgttacgactcttacaaaaagaatggcagaagaatta
accgagtatttattaaatcatgatataaaggcggcatatattcacagtaacgttgtaaac
ttagatagaataaagattataaacgatttacgtagtggagtttatgatgttttagttgga
gtaaatcttttgcgcgaaggtttggatctaccagaagtttcattagtggctattcttgat
gctgacaaagaaggatttcttcgtagtcatagaagtcttacgcaaacagcaggtagagca
gcccgaaatgtaaatggaaaagttattatgtatgcagatagtataacggaaagtatgcag
aagactattgatgaaactctacgaagacgtgagaaacaattagaatataatgcacaacat
catattactcctacacaaattaaacgttcaataaaggagattttgccaacaaagaatatt
tcgatgggtacaaatattgcgaacgaaaaaataaagctgcaaaaatacgatattccatca
gaagaattatctatggtggcagatcctatcataatgaaaatgacaaaggtgcagctcgaa
aagagtattcagaacacaacagctttaatgaaagaagctgcaaagaatcttgatttcttg
caagctgcacaatatcgcgatgaaatattacgcttacaagcagaattggaacaaaaataa
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