Prevotella nigrescens: J5A59_11175
Help
Entry
J5A59_11175 CDS
T07424
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pni
Prevotella nigrescens
Pathway
pni03030
DNA replication
pni03430
Mismatch repair
pni03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pni00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
J5A59_11175 (holA)
03430 Mismatch repair
J5A59_11175 (holA)
03440 Homologous recombination
J5A59_11175 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pni03032
]
J5A59_11175 (holA)
03400 DNA repair and recombination proteins [BR:
pni03400
]
J5A59_11175 (holA)
Enzymes [BR:
pni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
J5A59_11175 (holA)
DNA replication proteins [BR:
pni03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
J5A59_11175 (holA)
DNA repair and recombination proteins [BR:
pni03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
J5A59_11175 (holA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
QUB51863
LinkDB
All DBs
Position
1:complement(2026762..2027787)
Genome browser
AA seq
341 aa
AA seq
DB search
MPAKQGKTFQEIMKDLKARRFSPIYILMGEESYYIDQITNYIAENVLTPAEQDFNLNVCF
GADVTAVQVTDMAKRFPMMAEYQVVIVKEAQNIRSLDALEKYLKNPAKTTILVWCHKNGK
IDARKKVISLAEANGVVFESKKIREYQLASFMQNYLATKKIIIEPKAAQMMADHIGTDLS
RLTSELDKVALSLSEDDKRITPEIVEKEVGVSKDFNTFELRDAIVNRNVFKANQIVNYFD
SNPKAGSLYSFLPLLFSYFQNLMIVFYSPKNKSENDIAQILDLRSSWGAKDYSTGMRNFT
ARKTMDIIAKIREIDAKSKGLNNISTGAGDLMKELIFFILH
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgccagcaaaacaaggaaaaacttttcaggaaataatgaaagacctgaaagcacgacgg
ttctcgcctatatatatattgatgggcgaagaatcttactatatagaccagattacgaat
tatatcgcagagaatgtacttacgccagccgagcaagattttaatttaaacgtgtgcttt
ggcgcagatgttacagctgtgcaagtaaccgatatggcgaaacgtttccctatgatggca
gaatatcaagtagtcattgtaaaggaagcgcaaaatattcgttcgctcgatgcattggag
aaatatttaaaaaatccagcaaaaacaacaattttggtttggtgtcataaaaatgggaag
attgatgcaagaaaaaaagtgataagtctggcagaagctaatggggtggtgtttgaaagt
aaaaaaataagagaatatcaacttgcaagttttatgcagaattatttggcaacaaagaaa
ataataattgaacctaaagctgcacaaatgatggcagaccatattggaaccgatttgagt
cgtctgacatcagaactcgataaggttgccctttcattatcagaagacgataaaagaatt
acaccagagatagtggaaaaagaagttggtgtgagtaaagattttaacacttttgaattg
cgcgatgctatagtaaatcgtaatgtttttaaagctaatcagattgtaaattattttgat
agtaatccaaaggcgggttctctctattcttttttgcctttactcttttcttacttccaa
aatttaatgatagttttctattcgccaaagaataaatcggaaaacgatatagcacaaata
ttagatttgagaagcagctggggagcgaaagattatagtacaggaatgagaaattttact
gcgagaaaaacgatggacatcatagcaaaaattagagaaattgatgcgaaaagtaaaggc
ttgaataatataagtactggggcaggggatttgatgaaagaattaatctttttcattctg
cactaa
DBGET
integrated database retrieval system
