Paenibacillus nitricinens: ACN6KS_27545
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Entry
ACN6KS_27545 CDS
T11296
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
Organism
pnj Paenibacillus nitricinens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
XYY65877
LinkDB
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Position
complement(6155915..6159526)
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AA seq
1203 aa
AA seq
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MLDVNNFEFMKIGLASPEKIRSWSRGEVKKPETINYRTLKPEKEGLFCERIFGPQKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLALDM
SPRSLEEIIYFASYVVTDPGETPLEKKQLLSEKEYRSYREKYGYGFQAGMGAEAVKKLLQ
DIDIDKELEFLKEELRTAQGQRRNRAIKRLEVIEAFRNSGNKPDWMIMDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPDIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPYLKMYQCGLPKK
MALELFKPFVMKELVNKGLAHNIKSAKRKVERVSPEVWDVLEEVIREHPVLLNRAPTLHR
LGIQAFEPILVEGHAIRLHPLVCTAYNADFDGDQMAVHVPLSAEAQAEARILMLASGNIL
NPKDGKPVVTPSQDMVLGTFYLTMDNKEEKGSGMILRTVNEAVSAYQRGTAGLHARVAIP
VKALGKTCFTEKQQGAMLITTIGKIIFNEIYPSSFPYINEATKTNLLHGTPEKYFIYEKG
ADIRELIESAPEASAVGKEYLGLIIARCFETYHTTKTSMILDKIKQLGFTYSTRSGVTVA
VSDVIVPEEKVTILKESEAKVDVVANQYRRGLITNDERYDRVIEIWSKTKDDLTNILLKS
MDRFNSIMLMVDSKARGNKSQITQLGGMRGLMATPSGRIFELPIKANFREGLTVLEYFIS
THGARKGLADTALRTADSGYLTRRLVDVAQDVIVREEDCGTDKGFTVSRIQDGKEVIEDL
YDRIEGRYCFETVRHPETGEIIVHRNDLIDSDKAEAIVDAGVTKLQIRSVLSCRARHGVC
KKCYGRNLATGKHVEIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEL
FEARNPKGQATISEIDGVIKEIRETKDRREIEVQGEAESKTYSITYGSRLRVSEGQEIEA
GDELTDGSIDPKEMLRIKGIRGVQNYILQEVQRVYRNQGVEINDKHIEVMIKQMLRKIRI
IDAGDTSLLPGAFADIHEYEAANKEAILSGKEPAVAKPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKVDKLLGLKENVIIGKLIPAGTGMNRYRNVKLSDPNAESALESLEPV
PAE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttgttggacgttaacaattttgaatttatgaaaatcggactcgcttctccggagaagatt
cgttcatggtcccgcggagaagttaagaaaccggaaaccattaactatcgtacattgaaa
ccggaaaaagagggtcttttctgtgagcgtatctttggaccacaaaaagactgggaatgt
cattgcggtaaatacaaacgtgtccgttataagggcgtagtctgcgaccgttgtggcgtt
gaggttacccgtgctaaagttcgtcgtgaacgtatgggtcacattgaattggctgctccg
gtatctcatatctggtacttcaaaggtatcccaagccgcatgggtttggcactagatatg
tctccaagatcacttgaagagattatctacttcgcttcgtatgttgtaactgacccaggt
gaaacaccactggaaaagaaacagcttctatccgagaaagaatatcgtagctaccgtgaa
aaatacggttacggtttccaagccggcatgggtgctgaagctgttaaaaagcttcttcaa
gatatcgacatcgataaagagctggaattcctcaaagaagaactgcgtacggcccaaggc
caacgccgtaaccgggcgatcaaacgtctggaagtcattgaagcattccgtaactccggc
aacaagcctgattggatgatcatggatgttcttccggttattcctccggagcttcgtccg
atggttcaattggatggtggccgttttgctacgtccgacttgaatgatctctatcgtcgt
gttattaaccggaacaaccgtctgaagagactgctggatcttggtgcacctgacattatc
gtgcagaacgagaaacggatgctacaggaagctgtcgatgctctcatcgataacggccgt
agaggacgtccggtaacgggtcctggtaaccgtccattaaaatctctcagccacatgctg
aaaggtaaacaaggacgtttccgtcagaacttgctcggtaaacgggttgactactctggt
cgttccgttatcgttgtaggaccgtacctcaagatgtaccagtgcggacttcctaagaaa
atggcgctagaattgttcaaaccttttgtcatgaaggaattggttaataagggcctagcc
cacaacataaagagcgcaaaacgtaaagttgagcgtgtaagtcctgaagtatgggatgta
cttgaagaagtaatcagagagcacccagtacttctaaaccgcgcaccaacacttcaccgt
ctcggtatccaagcttttgaaccgattttggtggaaggtcatgctattcgtcttcaccca
ctcgtatgtacggcttataacgccgactttgacggtgaccaaatggcggtgcacgttcct
ctgtcagcagaagctcaagcggaagcacgtattctcatgcttgcatccggtaatatcttg
aaccctaaagacggaaaaccggttgtaacaccttcccaggatatggtccttggtactttc
tacctgaccatggacaacaaggaggaaaaaggatcaggtatgattctgcgtaccgtaaat
gaagctgtatcagcttaccaacgcggaactgcaggacttcatgctcgtgtagctattcca
gttaaagcactgggtaagacttgctttacggaaaaacaacaaggcgcaatgttgattact
acaatcggtaagattatctttaatgaaatttacccaagtagtttcccttatatcaatgaa
gcgactaagactaacttgctgcacggcacgccagaaaaatactttatctatgaaaaaggt
gcagatattcgcgagctgattgaatccgctcctgaagccagcgctgtaggtaaagaatat
ctgggtctgattatcgcacgttgttttgaaacttatcatacaaccaaaacctctatgatt
ttggataaaattaaacaactcggcttcacttattccacacgttccggtgttaccgttgcc
gtgtcggatgttatcgtgcctgaggagaaagttacgatcttgaaagagtccgaagctaag
gtagatgtggttgctaaccaatatcgccgtggtctgatcactaatgacgaacggtacgac
cgtgttattgagatctggtcgaaaacgaaggatgatcttacgaacatcctgctgaaatcg
atggaccgtttcaactctatcatgctcatggttgactccaaagcgcggggtaacaaatcg
cagatcactcagctgggtggtatgcgtggtctgatggcaacaccttcgggtcggattttc
gaattgccaattaaagcgaatttccgtgaaggtcttacggtcttggagtactttatttcc
actcacggagcgcgtaaaggtcttgccgataccgcacttcgtactgctgactccggttac
ttgactcgtcgtctcgttgacgtagctcaggacgttatcgtccgtgaggaagattgtgga
acggataaaggatttacagttagtcgtattcaggatggtaaagaggttattgaggatctg
tatgaccgtatcgaaggtcgttactgcttcgagactgtccgtcatccagaaacaggcgaa
atcattgttcaccgcaacgatttgattgactcagataaagcggaagcaatcgtagacgct
ggtgtaactaagctacaaatccgctctgtactaagctgccgtgctcgtcatggtgtttgt
aagaaatgttacggtcgtaacttggcaactggtaaacacgttgagatcggtgaagcagtt
ggtattatcgctgcacaatctatcggtgaaccaggaacccagcttacaatgcgtacgttc
cataccggcggtgttgccggtgatgacatcacgcaaggtttgccgcgtattcaagagttg
tttgaagcccgtaaccctaaaggtcaggctacaatcagtgagatcgatggtgtaatcaag
gaaatccgtgaaactaaggatcgtcgtgaaatcgaggttcaaggtgaagcagaatccaag
acttattccataacttatggttcacgtctacgtgtcagcgaaggccaagagattgaagcc
ggcgatgagttgacagacggttcgattgaccctaaagaaatgctgcgaatcaaagggatc
cgtggggtacaaaactacattctgcaagaagttcagcgtgtatatcgtaaccagggcgtt
gagatcaatgataagcacattgaagttatgatcaaacaaatgcttcggaagatccgtatc
attgatgcaggtgacacaagtctgttaccaggtgcgtttgcggatattcatgaatatgaa
gctgctaacaaggaagccatcttgtctggtaaagagcctgcagttgctaaaccagtcttg
ctcggtattaccaaggcatctcttgagacagattccttcttatccgctgcatctttccaa
gaaacaactcgtgtcttaacagatgctgctatcaaaggcaaagtagataagttgcttgga
ctcaaagaaaatgttattatcggtaagttgattcctgcaggtactggtatgaatcgttac
cgtaatgttaagttaagtgatccaaatgcagaaagcgcgcttgaatctttagagccggtt
cctgctgaataa
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