Paenibacillus nuruki: AASFL403_01385
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Entry
AASFL403_01385 CDS
T09651
Symbol
gabR
Name
(GenBank) HTH-type transcriptional regulatory protein GabR
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnk03000
]
AASFL403_01385 (gabR)
Transcription factors [BR:
pnk03000
]
Prokaryotic type
Helix-turn-helix
GntR family
AASFL403_01385 (gabR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_41
HTH_24
HTH_Crp_2
DIP2311-like_C
Motif
Other DBs
NCBI-ProteinID:
CAJ1313839
LinkDB
All DBs
Position
403:269000..270535
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AA seq
511 aa
AA seq
DB search
MDITIAYQRAIQTYQHKYLALYHALREGILGGSLASGTRLPSTRDLAAMYGLSRGSVSEA
YDMLLAEGYVQSAVGKGTFVIEQPIVSGKEVHIEASSYINEKAPLSSLSVWGQRIIQMEQ
EIIQFRKDHSDQRDDQTPSAISNTRPPLEQISFQSGDIMLEGSSQTSWKSAMSAASKDLQ
KSTTDAALTTVQGDIGLREAICNHVGRTRGITATAEQVVLCSGSMEVITLLCQLLINEDD
QVILEDPCYSGMRRAIIACGGVIQPAPLDEHGVIPQDWKARLLFVTPGRQFPTGAVLPLA
RRQQLLEWANTHSAWIIEDDYDSEFRWSGRPIEPLKALDQTDSVIYVGSFSKSMFSSLRL
GYAILPTVLAEALTAAKRLYDPLPPARLEQRALARFMIRGDYVRHLRRMTRLYRSRYDVF
QQSIQEERLDELFDWQQTDCGLHAYATWKHDATRYNQWMTIARTYGVIWRDAADYQLTPS
APSACFIFAHLSEPQIMEGVKRLRQSWESLQ
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggatattactattgcttatcagcgtgctattcagacgtatcagcacaaatatctagcg
ttatatcatgccttacgggaagggattctaggtgggtcacttgccagtggaacacgttta
ccttctactcgtgatctggctgcgatgtacggattatcgcgtggaagtgtatcggaagca
tatgatatgttactggctgaagggtatgttcaatctgctgtcggtaaaggaacatttgta
attgaacagcctattgtgtctggcaaagaagtacatattgaagcatcatcctacataaat
gaaaaagcacctttgtcttctttatctgtatggggacagcgtattatccaaatggaacaa
gaaattatacagtttcgaaaagatcattctgatcagagagatgaccagactccttctgct
ataagtaacactcgtccgccactagagcagatttcttttcaatcaggagacattatgtta
gaaggaagttcgcagacttcttggaaaagtgccatgtctgctgctagcaaagatttgcaa
aaatctactactgatgcagcacttacgactgtgcaaggagatatcgggttacgtgaagcg
atctgcaatcatgtaggaagaacaagaggaattacagcgactgctgaacaagttgtatta
tgtagcggttcgatggaagtgattacattgttgtgccagttgttgatcaatgaagatgat
caagtgattctggaagatccttgttattcgggtatgcggcgtgcgattatagcttgcgga
ggagtgatccagccggctccactagatgagcatggtgttattccacaagattggaaggct
agattgttatttgtaacgccgggtcgccaatttcctacaggtgctgttttaccattggct
cgtcgtcaacagctactagagtgggcgaatacccatagtgcatggattatcgaagatgat
tatgatagcgaatttcgctggtcaggtcgtcctatcgaaccgcttaaagcattggatcaa
acagatagcgttatctatgtcggttccttttccaaaagcatgttcagcagtcttcgtctt
ggttatgcgatcttgccaactgtgcttgctgaagctttaacggctgccaagcgattatat
gatccattaccgcctgctcgattagaacaaagagcactggcacgatttatgatccgtggt
gattatgtacgccatttgcgccgtatgacccgattatatcgttcccgttacgatgttttt
caacaatctattcaagaagagcgattggatgaactatttgattggcaacaaaccgattgc
ggtctacatgcctatgccacatggaagcacgatgctacccggtacaatcaatggatgaca
attgctcgcacatacggtgtgatctggcgcgatgctgctgattatcagttaacgcctagc
gctccatcggcgtgctttattttcgctcatttatcagagcctcagatcatggaaggtgtt
aagcgtcttcggcaatcttgggaaagtctacaatag
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