Paenibacillus nuruki: AASFL403_03415
Help
Entry
AASFL403_03415 CDS
T09651
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_03415 (addB)
Enzymes [BR:
pnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AASFL403_03415 (addB)
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
AASFL403_03415 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_22
UvrD-helicase
DEAD
Motif
Other DBs
NCBI-ProteinID:
CAJ1314230
LinkDB
All DBs
Position
403:752994..756545
Genome browser
AA seq
1183 aa
AA seq
DB search
MPLHFLLGRSGSGKTTTITNRIIDQITQQPDGPPILLLVPEQGSFQAQYALVRSNQSKGN
VRVQTYGFRRLANWVLQDVGGSAKTPIGEEGKKMLLYRLIQRHQSQLRMFGTSSDQFGFI
GKLSELYNEFKRHTITLEQLTEYSERLSTSARSPLLIDKLHDLQRIYEDFEQNLQGLYVD
GENTLTDLALAIPESQVLHNIDIWIDGFHSFTPQEYAVITALLQKANSVTIALTLDRPYD
GEPPHELELFHQTATTYIKLKQYATAIDESFTIDVENLSENPIDVPVRFQSSPQLAHLEN
AYRSSHRWQQAPYVKQVNERQDIHTYAAPDRRSEVESALREMIRLAREEGARWQEMGVFV
RQLVDYEHIIAPLLQDYEIPYFLDQKRSILQHPLAEFIRSALDIVQYFWRYEDVFRCIKT
GLLLPDDGRVTTEDIDRLENVVLASGIHGSRWTDGHPWKGIPSLSLEAGDEVKEISEREL
AEGQRMQQARQLVVEPLYRFEKRIKKAKHAKEMCIALYQLLEDCQIAMHLEHMSTTATAQ
GNPLRAREHIQIYGEIIDLLDQMVDIMAEDAIDLGTFAGLLETGLSGIRLGIVPPAIDQV
LIGSMDRTRPMDIKYAFVLGMNEGIVPSLFPDSGILSEPERTNMLEGGLELSPGSKRLLL
NEQFLIYHALTVASSKLWLSYALTDDEDKGLLPSEVITNVHKLFPFLQEQVATTPLSAQS
NDIESLRYVTTPTTTLPHVIAQLREWSRGTTIADSWWHVLNWYTAREAWRPQISMLVQSL
FYRNTGELLETETSRHLYGQTLRTSVSGMEQFVSCPFAHFASRGLRLRERQEYRLKAPDI
GQLFHASLTDLATTLKEQGRAWGELTREECVEIAYEAVDKHIPRLQGQILSSSKRYNYIS
RKLREIVSRASIMLGEQARRGDFEPLYLELAFGPNGQWPPLRFTLENGCTMEIVGRIDRV
DVAEGDDTLLLRIIDYKSSQTDLKLHEVYYGLALQMLTYLDVLLTHAEQQLGQSAQPAGA
LYFHVHNPMLQAGNGLSMQQSEQEMLKRFKMKGLLLADRDVIGKMDTELDKGYSAILPVA
VKADGGFYSSSAVATGEQWQELLRNVRQTAQEIGTQITDGTTQITPYRIEQEKACDYCDY
KSVCQFDETLKDNQYKLLQKPGKNETWELLQNRHDYQKGDSPS
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
atgccattgcattttttattaggtcgctctggaagtggcaaaacgaccacaattactaat
cgaattattgatcaaattacacaacaacctgatgggccacctatcttgttattagttcct
gaacagggttcttttcaagctcaatatgcacttgttcgttccaatcaatcgaaaggaaat
gtacgtgtgcaaacgtacggttttcgacgcttagctaattgggtgcttcaagatgtaggt
ggcagtgccaaaacaccgatcggtgaagaaggtaaaaaaatgcttctttatcgattaatt
cagcgacatcaatcgcaactacggatgtttggtacatctagcgatcagtttggttttatc
ggcaaattaagcgaattatataatgaatttaagcgtcatacaattacattagaacagtta
acggaatatagtgaacgtttatccacttcggcgcgctcaccgttgttaattgataaattg
catgatctacaacgtatttatgaagattttgaacagaatctgcaagggttatatgtagat
ggggaaaatacgttaacagatctggctttggcgattccagaatcacaggtgctgcataat
atcgatatctggatagatggatttcatagctttactccacaagaatatgctgtgattaca
gctttattgcaaaaagccaattctgtcacgattgcgttaacattggatcgtccttatgat
ggtgagcctcctcatgagctagagcttttccatcagactgctacaacgtatatcaagtta
aagcagtacgctacagcgattgatgaatcgtttactatagatgttgaaaatctttcggag
aatcctatagatgttcctgttcgttttcaatccagtccacagcttgctcatttggaaaat
gcgtatcgttcatctcaccgctggcaacaagctccgtatgtgaagcaggtaaatgaacgt
caagatattcatacgtatgctgctcctgatcgtcgttcagaagtggagagtgcgcttcgc
gaaatgattcgtttggctcgtgaagaaggtgcacgctggcaagagatgggcgtttttgta
cgtcaattagtagattatgaacatattattgcaccactactacaagactatgaaattccc
tattttctcgatcagaaacgtagcattttacaacatcctttagcagagtttatacgttca
gcactggatattgtgcaatatttttggcggtatgaagatgtattccgctgtatcaagaca
gggctattacttccagatgatggacgtgtcactacagaagatattgatcgtttggaaaat
gtggtgttggcttctgggattcatggatcacgttggacagatggacatccgtggaaaggt
attcctagcctttcactcgaagcgggggatgaagttaaagaaattagcgaacgtgaatta
gctgaaggacaacgcatgcaacaagcacgtcagttagtagtggaaccattgtaccgattt
gaaaaacgaatcaaaaaagcaaaacatgccaaagaaatgtgtatcgctctgtatcagcta
ctggaagattgtcagattgcgatgcatttggaacatatgagtacaacagccacggcgcaa
ggcaatccattacgtgcgcgtgaacatatacagatctatggagaaattatcgatttactg
gatcagatggtggatattatggcagaagatgctatagatctgggaacttttgcaggctta
ctggaaacaggattaagcggcatccgtctagggattgttcctccagcgattgatcaggtg
ttgatcggttctatggatcgtactcgtccgatggatatcaaatatgcattcgttttgggc
atgaatgaagggattgtgccttcactatttccagacagtggtattttgagtgaaccggaa
cgaaccaatatgttggaaggtggtttagagctgtctccaggtagtaagcgtcttttgtta
aatgagcaatttttgatctatcatgcgttaacggtagccagttccaaattatggcttagt
tatgcattgacagacgatgaagataaaggacttttgccttctgaagtgattacgaatgtg
cataaattatttccttttttacaagaacaagttgctactactccattatctgctcaatct
aatgatatagaatctttgcgatatgtgactacaccaactacaacgttaccacatgtaata
gcacagttacgggaatggagtcgtggaacaacgattgcagattcatggtggcatgtattg
aattggtatacagcacgtgaagcatggcgaccgcagatcagtatgttagttcaatcttta
ttttatagaaatacaggcgaattattagaaacggaaaccagtcggcatttatacgggcag
acgttacgtaccagtgtatcaggcatggagcagtttgtttcttgtcctttcgctcacttt
gcttcccgtggattacgattgcgagaacgccaagagtatcggttgaaagcacctgatatt
ggacagttattccatgcttcattaaccgatcttgccactacactgaaagagcaaggacgg
gcatggggagaattgactcgtgaagagtgtgtagaaattgcttatgaagctgtagataag
catatcccacgtctgcaaggacagattctttccagttccaaacgatacaattatatttca
cgtaaattgcgtgagattgtgagtcgtgcttcgattatgttgggagagcaagcacgccgt
ggagattttgagccactttatttagagctggcatttggaccgaatggacaatggccaccg
cttcgttttacccttgaaaatggatgtacgatggagattgtaggacgaattgatcgggtg
gatgttgctgaaggtgatgatacattattgctacggattatcgattacaaatccagtcaa
accgatctcaaattgcatgaagtctattacggacttgctttgcaaatgctgacgtatctg
gatgtattgctaactcatgcagaacaacaattaggtcaatcggcacaaccagcaggtgct
ctttatttccatgtgcataatccgatgctacaagcagggaacgggctaagtatgcaacaa
tccgaacaagaaatgctcaagcgtttcaaaatgaaaggattacttcttgcagaccgtgat
gtgattggcaaaatggatacagaactggataaaggatattctgcgattcttcctgtagct
gtcaaagcagatggaggattttacagcagttcagcagtagccacaggagagcagtggcaa
gaattgcttcgtaatgtgcgtcagacggctcaagaaattgggacgcagatcacagatggt
acaacacagattacaccttatcgtatagaacaagaaaaagcatgtgattactgtgattac
aaatcggtctgccaattcgatgaaacgttaaaagataatcaatataaattactacaaaaa
ccgggcaaaaacgagacatgggaacttttacaaaaccgtcatgactaccagaaaggagat
tcaccttcatga
DBGET
integrated database retrieval system
