Paenibacillus nuruki: AASFL403_03425
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Entry
AASFL403_03425 CDS
T09651
Name
(GenBank) Nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_03425
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AASFL403_03425
Archaeal homologous recombinant proteins
AASFL403_03425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
TetR_HI_0893_C
Metallophos_3
Motif
Other DBs
NCBI-ProteinID:
CAJ1314232
LinkDB
All DBs
Position
403:760891..762066
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AA seq
391 aa
AA seq
DB search
MRILHTADWHFGRTLEGRSRLDEQIAFVDELVQIADDQQADLILMAGDVYDSVNPPAVAE
QLFYEAAARLTANGRPLAVIAGNHDQPDRIASATPLVQGRGIYLLGTPAAQALTIPVPRT
SETAIVAALPYPSEARLNELLTEEHDEDLIRRAYSERVGMLMRQLATDFRSDTINLAMSH
IYALGGVESDSERPIQVGGAYTVDPSALYTGAQYTALGHLHRAQAVKGEGMIRYSGSPLA
YSFSEAGQAKSVTMLDVVPGGIPQIEEIFLTCGRPLVRWKAKGGLTEVHQWLEEGRDRNA
FIDLEISLLEALSMSDIQSIRKAYSGIVNIRPVYPETEAQQSFAERAQLPVHELFRTFYA
RQTGGAVPEDRLVELFLELIDEEETGEEQSS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattttacatacagctgactggcattttggtcgaacattagaaggcagaagtcgt
ctcgatgaacaaatcgcttttgtcgatgaattggttcagattgcagatgatcaacaagcc
gatcttattctgatggcaggcgatgtctatgattctgtgaatccacctgctgtagcagaa
caattattttatgaagccgccgctagattaacagctaatggtcgtccacttgctgttatc
gcagggaatcatgatcaacctgatcgtattgcgtcagcgacaccattggttcaagggcga
ggtatttatttattaggtacacctgctgcacaggctttaactattcctgtacctcgtact
tcggagacagctatagtggcagcattaccttatccatccgaagctagactgaatgaatta
ttaaccgaggaacatgatgaagatttaatacgtcgtgcctatagtgaacgtgtaggcatg
ttaatgcgacaattagcgactgacttccgttcggatacgatcaatctagctatgagccat
atctatgctcttggaggagtcgaatcggattcagagcgccctattcaagtaggtggtgcg
tatacagttgatccttctgcattatatacaggagctcaatatacagcgctaggtcatcta
caccgtgctcaagcagtcaaaggagaaggaatgattcggtatagtggttctccgctagct
tatagtttttctgaagcagggcaagccaaatctgtcacgatgctcgatgttgtacccggt
ggtattccacagatagaagaaatctttttaacttgtggtcgtcctttagtgcgctggaaa
gcgaaaggcggtctgactgaagtccatcaatggttagaggaaggcagagatcgcaatgct
tttatcgatctggaaatttcattgttagaagctttgtcgatgtctgatattcaatcgatt
cgcaaagcttatagtggcattgtcaatattcgtcctgtatatccagaaacagaagcacag
caatcttttgcagaacgtgctcaattgcctgtccatgaattgttccgtacgttttatgca
cgccagacaggtggagccgtgcccgaagatcgattagttgagctgtttttggaactgatc
gatgaagaagaaaccggggaggaacaatcatcatga
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