Paenibacillus nuruki: AASFL403_03430
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Entry
AASFL403_03430 CDS
T09651
Symbol
sbcC
Name
(GenBank) Exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_03430 (sbcC)
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AASFL403_03430 (sbcC)
Archaeal homologous recombinant proteins
AASFL403_03430 (sbcC)
BRITE hierarchy
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_21
SMC_N
AAA_23
ABC_tran
DUF87
Motif
Other DBs
NCBI-ProteinID:
CAJ1314233
LinkDB
All DBs
Position
403:762063..765476
Genome browser
AA seq
1137 aa
AA seq
DB search
MKPITLKLSGLQSYREQQEIDFEALCETGLFGIFGPTGSGKSTVLDAITLALYGKVERAY
NGTQGIMNHSEDSLFVSFSFELLSAEGAQRYRVERRFKRTGDHTVSNAMSRFIEMRADGD
VVVADKLAEVTRCVEDYIGLKMDDFTRAVVLPQGKFAEFLSLKGSDRRQMLQRLFHLERY
GDRLMQKLSQRVKETDNVLGKLYAEQTGLGEASAEALQTAIERLETAIQEAEQRRQELVD
ITARTEQWSKIREYQREQAELQQRLTQLQQHEAEIAHKEQQIEQALSAQNLLPLLDAWRT
HEAKAIQEQQRVTTLQQDLQQAEIAVATAVEREQKAKQQLTEQEPQLMTRIEQLQQALQL
QKECVALEQDQQQIHQQLENIQKQWEEASHQVQREQMLLDKARQRQEELNKQLKACEVRS
QDRRELQEAQQQLSALNTARTRLQEQQTEYDGYTQSAQQANQVWQKLIEQEATRSEQEQQ
LQQHVFSLYQEHQQLEHVLQQAHQSAEQLEEQYAQQSREAESNRLASLLAVELQEGQPCA
VCGSTHHPQPAHDIEHKVTADNQSVADTTTEQTQALKQMKQNLQVVQQHVRGRQIELDSH
MQEWDWQIKDSDSLTASSDQATLLSDQELQAQWLDIQAHNQNLEQQTRELQQQLRQWRQN
EREWSGRKVTAQSEQQSSARLSEQSNTRLQAATQTLEQLLEQWQQTLPHLTEQSARERFE
ALAQMDEQAEKIREGLDKSVPYIEEREQAIKHGTEQINTLDKQRIQDQTRQEGNQRLLQE
KKNRLTQWIGDQSAEKLLTETQQQQQQLRQQAEQTADLWRKALQQQQTATHQVELAVQSA
QSLQQQVDQHAEKWQQALQASPFDNEQSVSQSRMAEDQIQLYRQQIQQHRDQQHELSVHL
REVQNKLNGQSLSEEEWAQIQQQYTEARQADEMALEQRAKATRDREDLQERHVRWRELED
KRVILAQEAKHLSKLQASMRGNAFVEYIAEEQLMQVSLAASERLRFLTKQRYSLEVDSGG
GFVICDNGNGGIRRPVSSLSGGETFLTSLSLALALSAQIQLRGQYPLQFFFLDEGFGTLD
PELLDTVVTSLEKLHNDQLSVGIISHVPELRMRLPRKLVIVPAEQAGSGSKVVLERM
NT seq
3414 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaatcacacttaaattatccggtttacaaagttatcgtgaacaacaagaaatc
gattttgaagcactgtgtgaaacaggcctatttggtatttttggacctacagggagtggg
aaatcaactgttcttgatgctattacacttgctttgtatggcaaggtggaacgagcttac
aacggtacacaggggatcatgaatcattcggaagattcgttatttgtatcgttctctttt
gaattgttatctgctgaaggggcgcaacggtatcgagtcgaacgccggtttaaacgtacg
ggcgatcatacagtaagtaatgcgatgagccgttttatcgaaatgcgtgcagatggcgat
gttgtggttgctgacaaattagcagaagtcacacgttgtgtagaagattatatcgggctg
aaaatggatgattttacacgcgcagtcgtattaccacaaggtaaatttgctgaattttta
tctcttaaaggtagtgaccgtagacagatgttgcaacgtcttttccatctggaacgatac
ggtgaccgcttaatgcagaagcttagccagcgtgtgaaagaaacagacaacgtactaggc
aaactgtacgccgaacagacaggtctgggcgaagcctcagcagaagcgctacaaacagca
atagagcgcttagaaacagcgatccaagaagcagaacaacgtcgtcaagaactggttgat
attactgctcgtaccgaacaatggagcaagattagagaatatcaacgagaacaagctgag
ttacagcaacgtctaactcaattacaacaacacgaagctgagattgcccacaaagaacag
cagattgaacaagcgttatctgcgcagaacttattaccattattagatgcatggcgtact
catgaagccaaagccatacaagaacaacaacgtgtaactacattacagcaagatttacaa
caagcagagattgcagtagcgacagctgtagagcgtgaacaaaaagccaaacaacaatta
accgagcaagaaccgcaattaatgacacggatcgaacaactacaacaagcactacaattg
caaaaggaatgtgtagcattagaacaagatcaacagcagattcatcagcaattggaaaat
atacaaaaacaatgggaagaagcatctcatcaagtacagcgtgaacagatgcttttggat
aaggcaagacagcgtcaagaagaactgaataagcaactcaaagcttgtgaagttcgcagt
caggatcggcgtgaattacaagaagcccagcaacaattgtctgctctgaatacagctaga
acccgtctacaagaacaacaaaccgaatatgatggttatactcagtcagcacaacaggcg
aatcaagtatggcaaaaattaattgagcaagaagccactcgatctgagcaagaacagcaa
ttacaacaacatgttttttcgttgtatcaagagcatcaacaacttgaacatgtgctacag
caagcacaccaatctgcggaacaactggaagaacagtatgcacaacaatccagagaagca
gaatcgaatcgtctggcaagtctgttagcagtagaactacaagaaggtcaaccttgtgca
gtatgtggatctactcatcatcctcaacctgctcatgacatcgaacataaagtcacagca
gataatcaatcagtggcggatacaacaactgagcagactcaagcgctcaaacaaatgaaa
caaaatcttcaagttgtacagcaacatgttcgtggtcgtcaaatagagctagacagtcat
atgcaagaatgggattggcagataaaagattcagattcattaactgcttcttctgatcaa
gcgactcttttatcggatcaagaactgcaagcacaatggctagatatacaagctcataat
cagaatttagagcaacagactagagaattacaacaacaattaagacaatggcgtcaaaat
gaacgagaatggtcagggcgtaaagttacagctcaatctgaacaacaatcatctgctcgc
ctgtcagaacaatccaatactcgtctccaagccgctacacagacgttagagcaactttta
gaacagtggcaacagactttaccgcatctaacagaacagtcggcacgtgagcgatttgaa
gctctagcacagatggatgaacaagcagagaagatccgtgaaggattggataaaagtgtt
ccgtatatcgaagagcgtgaacaagccatcaagcatggtacagaacagatcaatacattg
gataagcaacgtattcaagatcagacccgtcaagaagggaatcaacgacttttacaagaa
aagaaaaatcgtcttacacagtggatcggcgatcaatcggctgagaagttacttacagag
acgcaacagcaacaacaacaattacgacagcaagcagagcagaccgcagacttgtggcgt
aaagcgctacagcagcagcagacagcaacacatcaagttgaattggctgtgcaatcagca
caatcgttacaacaacaggtcgatcagcatgcagagaagtggcaacaagcattacaagcc
tctccttttgataatgagcaaagtgtcagtcaatcacggatggcagaagatcagattcag
ttgtatcgtcagcagattcaacagcatcgtgatcaacaacatgaattatctgttcatttg
cgagaagtacagaacaagttaaacggacagagtctcagtgaagaagaatgggcacagata
caacagcaatatacagaagcccgtcaagcagatgagatggcattagaacaacgagccaaa
gccactcgtgatcgtgaagaccttcaagagcgtcatgtacgctggcgtgagctagaagac
aaacgagtcattttagcgcaagaggctaagcatttatccaaattacaagccagtatgcgt
ggtaatgcttttgtcgaatatattgcagaagaacaattaatgcaggtcagtctagccgct
tctgagcgattacgctttttgaccaaacaacggtattcattggaagtggattctggtgga
ggatttgtaatctgtgataatggcaatggtgggattcgtcgcccggtatcttctttatcc
ggtggagaaacgtttttaacttcgttatcattagcattagccttatcggctcagattcag
ttgcgcggtcagtatccgcttcagttctttttcctggatgaaggatttggtacgcttgat
cccgaacttttggatacagtggtgacttcactggagaagcttcataacgatcaactatcg
gtgggtattattagccatgttcctgaattacggatgagattgcctcgtaaattagtgatt
gtacctgcggagcaagcaggaagtggctccaaagtagtccttgaacgcatgtag
DBGET
integrated database retrieval system
