Paenibacillus nuruki: AASFL403_03675
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Entry
AASFL403_03675 CDS
T09651
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk00470
D-Amino acid metabolism
pnk00550
Peptidoglycan biosynthesis
pnk01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
AASFL403_03675 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
AASFL403_03675 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pnk01011
]
AASFL403_03675 (murD)
Enzymes [BR:
pnk01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
AASFL403_03675 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pnk01011
]
Precursor biosynthesis
Amino acid ligase
AASFL403_03675 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
Pyr_redox_3
AlaDh_PNT_C
Pyr_redox
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
CAJ1314281
LinkDB
All DBs
Position
403:819043..820518
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AA seq
491 aa
AA seq
DB search
MNDPETYRGQEVIVIGLARSGVEAAKALHRLGAIVTVNDLKPREQSPEAAELEALDIQVI
CGGHPEGLIHSGITLMVKNPGIPYTAPPIKQALDLSIEVITEVELAYRISDVPMIGITGS
NGKTTTTTWVGKMLEDNQLHPIVGGNIGIPLCEAVSEAQPENWIVAELSSFQLKGTTDFN
PKIACLLNVAETHLDYHGSMDDYVSSKRKIFANQGKDDTAIINWDDSYCRSLVPYIQAGT
LIPFSITENLGNYITAAKQASSTDSALTAGLYVSPAYIPEMEDDLPRTMMYCDQDGEVAI
LPVSELGIKGRYNIENALAACAIAIAAGCLPQNLADSLRDFRGVEHRLEYVQDHNQVQYY
NNSKATNAKATMMALSAFQDKGIVLIAGGLDRGSDYMDLLPVFQQQVKALVVLGQTRHKL
AKVAELAGISQVKIIEESEEANLAIKQAVEQAAALAEAEDIVLLSPACASWDMFSSYEER
GNAFKEAVHQL
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcctgagacatatcggggacaagaagtcatcgttatcggattagcgagaagc
ggtgtagaagcagccaaagctttgcatcgtttaggagcaatcgtaactgttaatgatttg
aaaccaagagaacaatcaccagaagcagcagaattagaagcgttggatattcaagtgatt
tgtggaggacacccagaaggattgattcattcgggtatcactttaatggtcaaaaatcca
gggattccgtatacagctcctccgatcaagcaagcgctagatctaagcatagaagtgatt
accgaagtggaattagcttatcgtatttcggatgtgcctatgattgggattacaggctca
aacggcaaaacaacgacaacaacatgggtcggtaaaatgcttgaagataatcaattacat
cctatcgtaggtgggaatattggaattcctttatgtgaagctgtaagtgaagctcagcca
gagaactggatcgtagccgaattaagtagctttcaattaaaaggaacgactgatttcaat
cccaaaattgcttgtttgttgaatgtagctgagacgcatttggattatcatggttcaatg
gatgattatgtgtcttctaaacgtaagatttttgcaaatcaaggcaaagacgatacagcc
atcattaactgggatgacagttactgtcgtagccttgtgccttatatccaagcaggtact
ttgattccattttccattacagagaatctaggcaattatataacagcagcaaaacaggca
tcatcaacggattcagcattaacagcgggattgtatgtatctcctgcttatattccagaa
atggaagatgatttaccacgtacgatgatgtattgtgatcaagatggagaagtagctatc
ttgcctgttagtgaactgggtatcaaaggtcgttataatatcgaaaatgcgttagctgct
tgtgcaatagcaattgctgcgggttgtctaccgcaaaaccttgcagattcactacgtgat
tttcgtggcgtggaacatcgcttagaatatgtacaggatcacaatcaggtacagtattat
aataattccaaagcaaccaatgcaaaagcgaccatgatggcattatctgcgtttcaagat
aaaggtattgtcttaattgcgggtggactggatcgtggttctgattatatggatttgcta
cctgtatttcagcaacaagttaaagcattagtggtgttaggacagactcgccacaaatta
gctaaagttgcagaactggcaggtattagccaagtgaagattatcgaagaatcagaggaa
gctaacttagctatcaagcaagctgtagaacaagcagcagcgcttgctgaagcagaggat
attgtcttattgtctcctgcgtgtgcaagttgggatatgttctcttcgtatgaagaacgt
ggaaatgcgtttaaagaagcagtacatcaattataa
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