Paenibacillus nuruki: AASFL403_08150
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Entry
AASFL403_08150 CDS
T09651
Symbol
ybfI
Name
(GenBank) Putative HTH-type transcriptional regulator YbfI
KO
K21701
AraC family transcriptional regulator, transcriptional activator for feuABC-ybbA operon
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnk03000
]
AASFL403_08150 (ybfI)
Transcription factors [BR:
pnk03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AASFL403_08150 (ybfI)
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_2
HTH_AraC
HTH_18
DUF7108_C
Motif
Other DBs
NCBI-ProteinID:
CAJ1315172
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Position
403:complement(1855923..1857539)
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AA seq
538 aa
AA seq
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MSKVLDQYRQFPSYIYKLQTVQYADQVLPRYDATLHSLLLFKEAKGQIIINGNRYDLHQQ
KVFLVPPHASLKIMIESDSRTEYYILSFHVLQPDGQGHFVPIELLGLYELHVAHFRWFAD
RVREIQDKHDQENLWDQMKANVIFQELLIHLFKEDAQEQKPDMNQAIAATLDHMEQHYAT
SITRNQLAEIAGMSADYYSRAFKKVVGKSPMEHLTEIRITQSKQVLLLSNDSFRSVAQQV
GFSDEFYFSRKFKAVTGRSPKSYIHNIRYSNKIASLKHLLTGHLVALGIEPYAAVINNAY
PITTQFEHTIPIGDNKPDLEKLMNAQPDLIVTCEFRDFEKSQKEKMYEQIAPTITLPFFE
DWRVHFQTIARIVGKDQEAQVWLEQYADIAQLLRQQLKNKLGQRSLLILGVGESKICIYG
KRNLGAVLYNDLGFIMPAGVENIAHYYEIQPEELIHYDADCILITPFQHDGTVGMQAGIE
QGIFRLCADPLWQRLQAVQTQSVYEMYTTQHMHTCYNSYSHLMLLEKVRQLFLDKNDK
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaggtattagatcagtatcgacaatttccttcctatatctataaattacagact
gtgcaatatgcggatcaagtgttaccacgctacgatgccacattgcatagtcttttactt
tttaaagaggccaaagggcagattattattaacggtaaccgttatgatctacatcagcaa
aaagtgtttttggtacctccacatgcttcgctcaaaataatgattgaaagcgatagtcgt
accgaatactatattctttcttttcatgtattacagcctgacggacaagggcactttgta
ccgattgagttgctcggactgtatgaactgcatgtggctcattttcgctggtttgccgat
cgtgtacgtgagattcaagataagcatgatcaagaaaatctatgggatcagatgaaagcc
aatgttatttttcaagaattgttaatccatttgttcaaagaagatgctcaagagcagaag
cctgatatgaatcaagcgatagccgctacattggatcatatggaacagcattatgccacg
tcgattactcgcaatcaattggcagagattgcagggatgagtgcagattattattcgcgt
gctttcaaaaaagtagtcggtaaaagcccgatggagcatctcactgaaattcggattaca
caatccaagcaagtgctccttctttctaatgattcttttcgctcggtggctcagcaggtg
ggatttagcgatgagttttattttagtcgcaaattcaaagcagtcacaggtcgttcgccc
aaatcctatattcataatatccggtattctaacaaaatcgcttcacttaaacatttgtta
accggtcatctggtagcacttgggatagaaccctatgcagcagtgattaacaatgcctat
cccataacaactcaatttgaacatacgattccgataggcgacaacaagcctgatctggag
aaattaatgaatgctcagcccgatctgatcgtgacctgcgaatttcgagattttgaaaag
tcgcaaaaagaaaaaatgtatgagcagattgcacccacgatcacattgcctttttttgaa
gactggcgtgttcattttcagacgattgcacgaattgtaggtaaagaccaagaagcgcaa
gtctggttagaacaatatgcagatatcgctcaattattacgccaacaattaaaaaataaa
ctcggtcaacgctcattgcttattcttggtgtcggagagagcaaaatctgtatttatggc
aagcgtaatctaggtgctgtattgtataacgatcttgggttcatcatgcctgctggggtc
gagaatattgctcattactatgaaattcaacccgaagaattaattcattatgatgcagat
tgtatcttaattactccgtttcaacatgatggaaccgtagggatgcaagcaggtattgag
caaggtattttccgtttatgtgcagatccattatggcaacgtctccaagcagtacagacg
caatctgtatacgaaatgtataccactcagcatatgcatacctgttataactcatattca
caccttatgctgttagaaaaagtgcgtcaattgtttttggataaaaacgacaaatga
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