Paenibacillus nuruki: AASFL403_09915
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Entry
AASFL403_09915 CDS
T09651
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pnk03016
]
AASFL403_09915 (truB)
Enzymes [BR:
pnk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AASFL403_09915 (truB)
Transfer RNA biogenesis [BR:
pnk03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AASFL403_09915 (truB)
Prokaryotic type
AASFL403_09915 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DCA16
Motif
Other DBs
NCBI-ProteinID:
CAJ1315525
LinkDB
All DBs
Position
403:complement(2272981..2273919)
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AA seq
312 aa
AA seq
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MNEFDGVLAVHKPAGFTSHDVVAKVRRLVSMKRIGHTGTLDPAVTGVLPLCLGRSTRIVE
YLQEMPKEYVATLRLGLATDTEDMTGTITEQIDTVEVSEEQVRHVLGQMIGTISQVPPMY
SAIKVDGKRLYELAREGKTIERKAREVTIYELEIIDFKAGDHPEVSFRALCSKGTYIRTL
CVDIGRALHVPSVMVELVRTQSAGISLDQCVTFEQIAEAVEQGVLEQHLIKPDQAMSNLP
SYIVDASVYKHTLQGKRISIDAIQPHDESQLLADMTIESPVFKLYAPDGIFIGIFRLEQP
AQEIVPVKVFLP
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaatttgatggagtgcttgcggtacataaaccggcgggcttcacttctcacgat
gtggttgccaaagttcggcgtcttgtaagcatgaaaagaataggacataccggtacactt
gatccagccgtaacaggtgtattaccattatgtctgggacgttcaacacgaattgttgaa
tatttgcaagaaatgcccaaagaatacgtagctacacttcgattaggattagctacagat
accgaagatatgaccggtacgattacagagcagatcgatacagtagaggtatcagaagaa
caagtacgtcatgtactggggcaaatgattggaacgatctctcaagtacccccgatgtac
tctgcgattaaagtagatggtaaacgtctgtatgaattagcacgagaaggcaaaacgatt
gaacgcaaagcacgagaagtaacgatctatgaattggaaatcattgatttcaaagcaggg
gatcatcctgaagtttctttccgagcattatgttcaaaaggaacttatattcgtacgctt
tgtgtagacattggacgtgctctgcatgtaccttcggtgatggttgaattggttcgcaca
caatcagcgggtatttcactcgatcaatgtgtaacatttgaacaaattgcagaagctgta
gagcaaggcgtattagaacaacatttgatcaagccagatcaagctatgtctaatctacct
tcttatatagtagatgcttcggtatataagcatacactacagggtaaacgtatcagcatc
gatgcgattcagccacacgatgaatcacaacttctagctgatatgacaatagagtcacct
gtatttaaattgtatgcaccagatgggatttttatcggtattttccgtttggaacaaccc
gcacaagaaattgtacctgttaaagtatttttaccgtaa
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