Paenibacillus nuruki: AASFL403_10645
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Entry
AASFL403_10645 CDS
T09651
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AASFL403_10645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_10645
Enzymes [BR:
pnk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AASFL403_10645
DNA repair and recombination proteins [BR:
pnk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AASFL403_10645
Prokaryotic type
AASFL403_10645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CAJ1315671
LinkDB
All DBs
Position
403:complement(2427564..2428238)
Genome browser
AA seq
224 aa
AA seq
DB search
MSAIFRNDWADVLEDELQKPYYLELRQFLAQEYRTATIYPDMYDIFNALHYTSLESTRVV
ILGQDPYHGPGQAHGLSFSVKPGVSIPPSLHNIYQELHDDLGCTIPKHGSLIHWAEQGVL
LLNAVLTVRRGQAASHQNQGWETFTDRVIEAVNERETPAVFILWGSHAQRKGAAIDRSKH
HVITSTHPSPFSAHKGFMGSKPFSHTNQFLESQGMEPIDWCIKD
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctatatttcgcaacgattgggcagatgtactagaagatgaactgcaaaagcct
tattatttggaacttcgtcaatttctagcgcaagaatatcggacagcaacgatctatcca
gatatgtatgatatttttaacgcactgcattacacttcattagaatcaactcgggtcgtt
attttgggtcaagatccttatcatggtccaggacaagcgcacgggttaagcttttcagtc
aagccaggcgtgtcgattccaccttcgttacataatatttatcaagagttacatgatgat
ctaggatgtacgattcctaagcatggttcattgatccattgggcagaacaaggagtttta
ttgttgaatgctgtactgacagtcagacgtggacaagcggcttcgcatcagaatcaagga
tgggagacatttacagatcgtgtgatagaagctgtaaatgaacgtgagacacctgctgta
tttattctgtggggaagccatgcacagcgtaaaggagcagccatcgaccgtagtaagcac
catgtgattacctctacgcatcccagtcctttttcagcgcacaaaggatttatgggcagt
aagccatttagccatacgaatcaatttttggaatcacaagggatggaaccgatcgattgg
tgtataaaggattga
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