Paenibacillus nuruki: AASFL403_11620
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Entry
AASFL403_11620 CDS
T09651
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03030
DNA replication
pnk03430
Mismatch repair
pnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AASFL403_11620
03430 Mismatch repair
AASFL403_11620
03440 Homologous recombination
AASFL403_11620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnk03032
]
AASFL403_11620
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_11620
Enzymes [BR:
pnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AASFL403_11620
DNA replication proteins [BR:
pnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AASFL403_11620
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AASFL403_11620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DUF6282
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
CAJ1315863
LinkDB
All DBs
Position
403:complement(2619480..2623280)
Genome browser
AA seq
1266 aa
AA seq
DB search
MTPFVHLHVHSEYSLLDGAARIRDLVSQAAESGMTAMALTDHGVMYGAIPFYKACKQHGI
KPIIGCEVYYTAGSRKEKAARKDQPIHHLLLLAKNEIGYRNLMKLSSIGHLEGFHYKPRV
DAEVLQQYHEGIICLSACLGGEIPQHLLHEQPEEAKKAALRYQAIFGEDFYIELQDHHIP
EQKKVMPLLINLAKELNIPLVATNDVHYLTEEDAKTQDVLICIGTGKTMDDEGRFRIPTN
QLYLKDSEQMESLFRHVPEAITNTNVIADRCELELTFGESLLPSYYPIPDELSPERYLEQ
LCRTGLEQRYQDTMYWTDPQERQHIEERLNYELKVIGSMGFADYFLIVWDFMKYAHAQGI
VTGPGRGSSAGSLVAYVLEITNVDPIKYKLLFERFLNPERITMPDIDIDFSDLRRDEVIE
YVVSKYGRDHVAQIITFGTLAARAAVRDVGRALNVPYADTDKAAKLIPAQVGMTISKALD
QVPELRDRYEKSAPVREMIDTALKVEGMPRHASTHAAGVVISSGVLTDIVPIQEGSEIAV
LTQYPMESLESIGMLKMDFLGLRTLSIMERCMTWIAEQEGHPVDFSKISDHDPQTYEMLS
QGDAMGVFQMESPGVRRVLRDLKPTAFEDIVSVVALYRPGPMDFIPKYIESKHGRTVPEY
PHPDLEPILSDTYGIIVYQEQIMQIASQMAGFTLAEADLLRRAVSKKKREILDEERVHFV
KGSIEQSYTEQEANVVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFIASMLT
AVMGTHRKVAEYVLECRRIGIEVLPPDVNTSGVTFTPVTAAMQQELEQQLLSKESATDDE
NAEAQDTASSSESPNSSQTSSSTGNIRFGLGAVKNVGTQAINSIIKERQDRPYDSLIDFC
RRVDPKACNKRVIESLIQAGAFDSLPGHRAQLLTMLDDTIKEAAKWRKEREELQIEMFAD
LGFVETHNWEVSYPDVAPYTTGEQLEFERELLGLYLSGHPLDDYEQVIEDSGLSRLMNLH
EGEDESIVAVAGMVVSLKLITTKQGKSMAFMELEDQIERCEVVLFPEVWRKSSALVDKGL
LLSVRGKLQKEDEGFKLLAEEVVTLSEESARELATRARQRMHIAKNKATAQTKQTNKSSS
TSTAKPYTKSTTSAKSVAPTEQETVPSSSASGVASVVNDAPHTDSHPEPMLKQRVFIKIT
KEAQQADKLAVLKKLLASHPGPVGTLLFYEETQKLFDLSETYSIKPSPELFQEMEQMLGE
GTVKVK
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atgaccccatttgttcacctgcatgtgcatagcgaatacagtctactggacggggctgcg
cgcataagggatcttgtgagccaagccgcagaatcaggcatgacagcaatggctcttacc
gatcatggagtaatgtatggagcgattccattttataaagcatgtaagcaacatggtatt
aagccgattattggttgtgaagtgtattacactgctggatcacgtaaagaaaaagcagca
cgtaaagatcaaccgattcatcatttattgttactagccaaaaatgagatcggttatcgt
aatctaatgaaattaagttcgattggacatttagaaggattccattacaaacctcgtgtg
gatgctgaagtattgcaacagtatcatgaaggtattatttgcctgagtgcttgtcttgga
ggagagattccacaacatttattacatgaacaaccggaagaagccaaaaaagccgctctt
cgttatcaagcaatttttggtgaagatttctatatagaattgcaagatcatcatattcct
gaacagaaaaaagtaatgccgttattaatcaatctagctaaagagcttaatattccatta
gtcgctaccaatgacgttcattatttaacagaagaagatgccaaaacgcaagatgttctc
atctgtattggtaccggtaaaacgatggatgatgaaggtcgttttcgtattccaacgaat
caattgtatctaaaagacagtgagcaaatggaatcgttattccgtcatgtgcctgaagcg
attacgaatacaaacgttattgcagatcgttgtgaattggaactgacttttggcgaatca
cttttaccgtcgtattatccgattccagatgaattatcacctgaacgttatttggaacaa
ttgtgtcgtacaggattagagcaacgttatcaagatacgatgtactggacagatcctcaa
gaacgtcaacacatcgaagaacgtttaaattatgaattaaaagtaattggtagtatggga
tttgccgattatttcctgattgtatgggattttatgaaatatgcacatgctcaaggcatt
gtaacaggccccgggcggggttcctcagcaggaagtctggttgcttatgtactggaaatt
accaatgtcgatccgatcaaatacaaattgttatttgagcgttttcttaatcctgagcgg
atcactatgcctgatattgatatcgattttagtgatctacgccgtgatgaagtgatcgaa
tatgtcgtttccaaatatggaagagaccatgtggcacagattattacatttggtacatta
gctgcgcgtgcagccgtacgtgatgtaggacgagcactcaatgttccttacgcagataca
gacaaagccgccaagttaattcctgctcaagttggcatgacaatcagcaaagcgttagat
caagttcccgaattacgtgatcgttatgaaaagtctgcacctgttcgtgaaatgatcgat
acagcgcttaaggttgaaggtatgccacgtcacgcttctacgcatgccgcaggggtagtg
atttcaagtggagtattaactgatattgtgccaatccaagaaggtagtgagattgccgta
ttgactcaatatccgatggaaagtctagaatcgattggtatgctcaaaatggactttctg
ggtctacgtacattatctattatggaacgctgtatgacatggatagcagaacaagaagga
catcctgttgatttctctaagatttcagaccatgatccacagacctatgaaatgctaagc
caaggcgatgcaatgggcgtgttccagatggaatctccgggtgtacgacgtgtgctgcgt
gatcttaagcctacagcctttgaagatattgtatcggtagtggctttgtaccgtccgggt
ccaatggactttattcccaaatatattgaatccaagcatggccgtaccgttccagaatat
ccacatcccgatttggaaccgatcctgagcgatacgtatggcattatcgtgtatcaagag
cagattatgcagattgcttcacagatggctggatttacactggcagaagcggatttgcta
cgccgagcggtttcgaagaaaaagcgcgaaattttggatgaagaacgggtgcattttgtt
aaaggaagtatagaacagtcttacactgaacaagaagctaatgtggtctacgatatgatt
gtacgatttgcagattacggattcccgagagctcatgcagcagcttatggtgtacttgct
tttcagacggcttatctcaaagcacattatccggtacaatttatcgcttcgatgttaacc
gctgtaatgggaacacatcgcaaagtagctgaatatgtattggaatgtcgccgtatcggg
atagaagtattaccacctgatgtgaataccagtggagtgacatttactccggtaacagca
gcgatgcaacaagagttagagcaacaattattatctaaagaatcggcaactgatgatgag
aatgccgaggctcaagatacagcttcatcgtcagagtcgccgaattcatcacaaacttct
tcatctacaggtaatattcgctttggtctaggcgcagtcaaaaatgtcggtacacaagcg
attaatagcattattaaagaacgtcaagatcgtccgtatgacagcctgatcgacttttgc
cgtcgtgtcgatcccaaagcgtgtaataagcgtgtaattgaatctttgatccaagcaggt
gcatttgatagtctacctggacaccgtgcccaattattaacgatgcttgatgatacgatc
aaagaagctgccaaatggcgcaaagaacgggaagaattacagatagaaatgtttgccgat
ctgggatttgtagagacccataattgggaagtgtcttatccagatgttgcgccttataca
accggagaacaacttgaatttgaacgtgaattgttagggttgtatttatcaggacatccg
ttagatgattatgagcaagtgatcgaagatagtggattgtcccgtctgatgaatctacat
gaaggcgaagatgaaagtattgtcgctgtagcaggtatggtcgtatcgcttaaactgatc
acaaccaagcaaggaaaatcgatggcttttatggagcttgaagatcagattgaacggtgc
gaagttgttcttttccctgaagtgtggcgtaaaagtagtgcgttagtagataaaggatta
ctgctcagtgtacgtggtaaattgcaaaaagaagatgaaggattcaaattgttagctgaa
gaagtagtgaccttgagtgaagagtctgcacgcgaattagcgaccagagctcgtcaacgg
atgcatatcgccaaaaataaagctactgcacagaccaaacagaccaacaaatcgtcatcc
acttcaaccgctaagccttataccaaaagtacaacgtctgcgaaaagtgtagcgccgact
gagcaagagacggttccttcttcatctgcttcaggtgtagccagtgtagtaaatgatgca
cctcataccgacagtcatcctgaaccgatgttgaagcaacgtgtatttatcaaaattacc
aaagaagctcaacaagcggataaattagcagtactcaaaaagctattagcgagtcatccg
gggcctgtaggtacgttgttattttatgaagaaacgcaaaaattatttgatcttagtgaa
acgtatagcatcaaaccttcacctgagctatttcaggaaatggagcagatgttaggcgaa
ggcacggttaaagtaaaataa
DBGET
integrated database retrieval system
