Paenibacillus nuruki: AASFL403_14315
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Entry
AASFL403_14315 CDS
T09651
Name
(GenBank) Pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk00040
Pentose and glucuronate interconversions
pnk01100
Metabolic pathways
pnk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AASFL403_14315
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AASFL403_14315
Enzymes [BR:
pnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AASFL403_14315
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GFIT
Motif
Pfam:
Pectate_lyase_4
Motif
Other DBs
NCBI-ProteinID:
CAJ1316393
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Position
403:complement(3182420..3183586)
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AA seq
388 aa
AA seq
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MTKRSKKSFAGMTMSVLSVIMLSTLLFPGFTMSYTHAASTGGYATTTGSNEAAVTVTTLA
ELKNAFNAGKHHIVIKGNIYGGAKPLTLTFATTNWNNTTIEGASGGGAVLQNIQLKFSGE
NLPAGTNIENVVIKNITFYGNIKDLQNLSGADTQPGGIGTNYLGVSFRRTSNILVDHVTM
YNISDDLFVISQGSDYATLSNSHFYFTDSWLNMNPNPIWNWVGSNQDLASERLALIIGSN
KNDSYTYGGGKLHVTMHHNWFGPNMKGRPLLRGYVHMYDNYFDNSTTPSGNNAQGYSQQQ
YNAAQIGSGGNIFSENNYFYKTNNSNQIGLDSNGDAYKFYERNNVYNAVTGTSATGAAFP
GGTSFPYSYSLDPAANVPNIVQANAGPK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaaagaagtaaaaaatctttcgcaggtatgacgatgtccgtactcagtgtcatc
atgttatccacattgttatttccaggattcacaatgagttatacacatgcagcatcgact
ggtggttatgcaacaacaacaggatcgaacgaagccgctgttacagtaactacacttgct
gaattgaaaaatgcgtttaacgcaggtaaacatcatattgtgattaaaggcaatatttat
ggtggagccaaaccattaacactgacgtttgctacaaccaattggaataataccacgatt
gaaggcgcaagcggtggtggtgcagtattacaaaatattcagttgaaatttagtggggaa
aatcttccggcaggaaccaatattgaaaatgtagtcatcaaaaatattacgttttatggg
aatatcaaagatttacaaaatttgagcggagcagatacacagcctggcgggatcggtact
aactatttgggcgtctctttccgtcgcacgagtaatattttagtcgatcatgtcactatg
tataatatcagtgatgatctatttgtgatctcacagggttcagattacgcaaccttgtcg
aacagtcacttttattttacagacagctggttgaatatgaatccgaatccgatctggaac
tgggtaggaagcaatcaagatctggcttctgaacgtttagcactgattatcggttcgaac
aaaaatgattcctatacttacggtggtggcaaattacatgtgactatgcatcataactgg
ttcgggccgaatatgaaaggacgcccgttgttacgtggatatgtgcatatgtatgataac
tattttgataatagtacaacaccatcgggcaacaatgcacaaggttattcacagcaacaa
tacaatgcagcacagatcggtagtggcggtaatattttttcggaaaataactatttctac
aaaacgaataacagtaatcagatcggtctagatagcaacggagatgcttataaattctat
gaacgcaataatgtgtataatgcagtcacaggcacatcagctactggagcagccttcccg
ggtggcacttcattcccgtatagttattcactagatccagcagctaatgtaccaaatatt
gttcaagcgaatgcaggtcctaaataa
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