Paenibacillus nuruki: AASFL403_16765
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Entry
AASFL403_16765 CDS
T09651
Symbol
trmB
Name
(GenBank) TrmB domain-containing protein
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pnk03000
]
AASFL403_16765 (trmB)
Transcription factors [BR:
pnk03000
]
Prokaryotic type
Helix-turn-helix
Other families
AASFL403_16765 (trmB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
MarR
HTH_IclR
MarR_2
Regulator_TrmB
HTH_24
HTH_11
DnaD_N
HTH_23
GntR
Penicillinase_R
HTH_Crp_2
DUF7342
NirdL-like_HTH
HTH_29
HTH_20
HTH_7
Sigma70_r4_2
Rrf2
HTH_27
HTH_AsnC-type
HTH_Cmi2_C
HTH_22
LexA_DNA_bind
HTH_PafC
Fe_dep_repress
HTH_36
Motif
Other DBs
NCBI-ProteinID:
CAJ1316873
LinkDB
All DBs
Position
403:complement(3749077..3749871)
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AA seq
264 aa
AA seq
DB search
MEQLLNHLRHLGFTELEAKVMVSLTQQGTQSGYEVAKRLGVSRSNVYATLQRLVSRGVIQ
LTPGEPARYTMMPIKEFTQMISGQMGESLTYLEQHMPSETHEQPSFFIVEGERKVIETLN
RELDKASEEIVAGIWREEAKWSRQGLERAEQRGVRVLWSFEGDEDGKFSGMLPLTASQQG
GRKFWLVVDRRWCIVGMRGDELPAQAIVTEHPLMVELLLQHFAQEIILFELENDLGAELI
QRYGEGYEHILNKYMPSFVHKDID
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggaacaattgcttaaccatttacgccatctagggtttactgaactggaagccaaagtg
atggtaagtctgactcagcaagggacacaatccggttatgaagtggctaagcgactgggt
gtatcaagatcgaatgtatatgctacactgcaacgtctggtatcacgaggagtgatccaa
ctgacaccaggcgaacctgctcgttatacgatgatgccgatcaaagaatttactcagatg
atctcaggtcagatgggcgaatcattaacttatttagaacaacatatgcctagtgaaact
catgaacaaccttctttctttattgtagaaggagaacgtaaagtgattgagacattgaat
cgtgaactggataaagcgagcgaagagattgtagcaggaatatggcgggaagaagccaaa
tggtcaaggcaaggattagagcgagcagaacaacggggtgtacgagtactttggtctttt
gaaggtgacgaagatgggaaattctcaggcatgttgcctttaactgcgagtcaacaaggg
ggacgcaagttctggctggtggtcgatcggcgttggtgtattgtaggtatgagaggcgat
gaattgcctgctcaagcgatcgttacagaacatccattgatggtagaattgttacttcag
cattttgcccaggaaattattctgtttgaacttgaaaatgacctgggtgctgagctgatt
cagcgctatggagaaggatatgaacacattttaaataaatatatgcctagctttgtacac
aaagatatcgattaa
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