Paenibacillus nuruki: AASFL403_18410
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Entry
AASFL403_18410 CDS
T09651
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03030
DNA replication
pnk03430
Mismatch repair
pnk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AASFL403_18410 (dnaX)
03430 Mismatch repair
AASFL403_18410 (dnaX)
03440 Homologous recombination
AASFL403_18410 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pnk03032
]
AASFL403_18410 (dnaX)
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_18410 (dnaX)
Enzymes [BR:
pnk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AASFL403_18410 (dnaX)
DNA replication proteins [BR:
pnk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AASFL403_18410 (dnaX)
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AASFL403_18410 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
AAA
DNAX_ATPase_lid
RuvB_N
TIP49
DnaX_C
AAA_22
AAA_30
AAA_5
AAA_16
AAA_7
AAA_19
AAA_assoc_2
AAA_14
AAA_2
RCF1-5-like_lid
End3
Rad17
B12-binding_2
PIF1
FlxA
Mg_chelatase
RNA_helicase
Motif
Other DBs
NCBI-ProteinID:
CAJ1317186
LinkDB
All DBs
Position
403:complement(4121058..4122809)
Genome browser
AA seq
583 aa
AA seq
DB search
MEHIALYRAWRPQSFKDMVGQQHIIQTLQNAIREERISHAYLFSGPRGTGKTSAAKIFAK
AINCEHGPAIEPCNECETCKRITSGNIMDVLEIDAASNRGVEEIRDLREKVKYAPTEVRR
KVYIIDEVHMLTTEAFNALLKTLEEPPAHVVFILATTEPHRLPATIISRCQRFDFRRVSL
VEQTDRLALIAGEEQIEADRDALEYIARLSDGGMRDAVSILDQVSAFTDGKVTYTQVLQM
TGGIASEQFAELASALLHGDIGKVLQMVESFMQEGKSAEKCMENLLYYFRDVLMIKMIPQ
AGDLTERMLDPEIFRETAAAFTKEQLFAMIDTLNHYQTEMKYAAQPQMLFEVALLKLGSI
PNTGSHGDHAAEVTTSSSSHGPTDASEIRQLKQQLAQLEQKLDKALKSGIAASGEAGDRN
QTGSSGRRPPTARVSSAAKIPSQIQSYVSNRNHSDFTKVSGSWGKILQRVKEEKVTIHAW
FVNCEPVSIHEDAVLVAFKHDMHRETIEKSVNKQIVESVLEEVLGGSHRLVTMMQKDWLE
AIEGAHEDPVEALELEHEGENAGEPLVDEAIQLFGESLVVVKE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtggagcatatcgcactttatcgtgcttggcgaccgcagtcgtttaaggacatggttgga
cagcagcatatcattcagacgctgcaaaatgccattcgggaagagcgtatttcacatgcc
tatctgtttagtggtccaagaggaacaggtaaaacgtctgctgccaaaatttttgcaaaa
gcgattaactgtgaacatgggccggctatagagccgtgtaacgaatgtgaaacttgcaaa
aggatcacatcaggcaatattatggatgtgcttgagatcgatgctgcatccaaccgtggt
gtagaagaaattcgtgatctacgggaaaaagtcaaatacgcgcctactgaagtacgacgc
aaagtatatattattgatgaagtccacatgttaacaacagaagcatttaatgcgttgctt
aagacgctggaagaaccaccagctcatgttgtttttattctagctacaacagaacctcat
cgattaccagctacgattatatcacgctgtcagcgttttgattttcgccgtgtatcttta
gtagagcagacagatcggcttgcattgatcgctggagaagaacaaattgaagccgatcgt
gatgcgttagaatacattgctcgtttatcagatggtgggatgcgtgatgcagttagtatt
ctggatcaagtatcagcttttacagatggcaaagtaacctatactcaagtattgcagatg
accggtggtatcgcttctgaacagtttgcggaactagcctctgcattgttacatggagat
atcggcaaagtactacagatggtagagtcatttatgcaagaaggtaaaagcgcagagaaa
tgtatggagaatctactctattatttccgtgatgtattgatgattaagatgatcccacaa
gcaggagatttaacagagcgaatgctcgatcccgagatttttcgagaaacagcagctgca
tttacaaaagaacaattgtttgccatgattgatacgttgaatcattatcagactgagatg
aagtatgctgctcagcctcagatgttatttgaggtcgctctattgaaattaggcagtata
ccgaatacaggatcacatggagatcatgcggcagaagtgactacatcttcaagcagtcat
gggccaacagatgcttcagagattcgacaactcaaacagcaattagctcaattagaacaa
aagctagataaagcgttaaaatcaggaatagcagcaagtggcgaagcaggcgaccgtaat
cagacaggaagctctggaagacgtcccccaacagcaagagtatcttcagcagccaaaatt
ccttctcagattcagagctatgtgagcaaccgcaatcatagcgattttacaaaagtatca
ggatcatggggcaaaatcctacaacgggttaaagaagagaaggtgactattcacgcatgg
tttgtgaactgtgagcctgtttcgattcatgaagatgctgttttggttgctttcaaacat
gatatgcaccgggaaacgattgaaaaatctgtgaataagcagattgtagagtctgtatta
gaagaagttctaggcggttctcatcgattggttaccatgatgcaaaaagattggttagaa
gcaatagaaggagctcatgaagatccggttgaagcattagagctagagcacgaaggcgaa
aatgcgggtgaaccattagtagacgaagctattcaattatttggagaaagcttagtcgtt
gttaaagaatag
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