Paenibacillus nuruki: AASFL403_18450
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Entry
AASFL403_18450 CDS
T09651
Symbol
rpoE
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AASFL403_18450 (rpoE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnk03021
]
AASFL403_18450 (rpoE)
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_18450 (rpoE)
Transcription machinery [BR:
pnk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AASFL403_18450 (rpoE)
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AASFL403_18450 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
Motif
Other DBs
NCBI-ProteinID:
CAJ1317192
LinkDB
All DBs
Position
403:complement(4129982..4130524)
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AA seq
180 aa
AA seq
DB search
MSTPQELKIDPEKVHEIPMVDLAVAILKKINTPLYYRDLMKEVAELRGFTKAQTDEYIAQ
LYTEINVDGRFACVGTNLWGLKRWYPLERAEDPIANAKRPRIINDEEDDDIEDEEFNNED
VVDADEPEDENYDAVDEDSDDIFVDGEDDDEDKADLVIDDEDDDDDEDEDEEYVEEDKKD
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgagtacaccgcaagaattaaaaatcgatccggaaaaggtacacgaaattccgatggta
gatttggctgttgctattttgaaaaaaatcaatacgcctctatactaccgtgaccttatg
aaggaagttgcagaactacgtggctttactaaagcacaaactgatgaatatatcgctcaa
ctatatactgaaattaatgtagatggtcgttttgcctgtgtaggtacaaacctatggggt
cttaaacgttggtatccgcttgagcgtgcagaagatccaatcgctaatgcgaagcgtcct
cgtattatcaacgatgaagaagacgatgatatcgaagacgaagaattcaataacgaagat
gttgttgatgcagatgagccggaagatgagaactacgatgcagtagatgaagattccgat
gatatctttgttgacggtgaagatgatgatgaagataaagctgatcttgttatcgacgac
gaagatgatgacgacgatgaagacgaagatgaagaatatgtagaagaagataagaaagat
taa
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