Paenibacillus nuruki: AASFL403_19290
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Entry
AASFL403_19290 CDS
T09651
Name
(GenBank) rhamnogalacturonan endolyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
AASFL403_19290
Enzymes [BR:
pnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
AASFL403_19290
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Gene cluster
GFIT
Motif
Pfam:
RhgB_N
CBM-like
fn3_3
CarboxypepD_reg
Chitin_synth_1
Motif
Other DBs
NCBI-ProteinID:
CAJ1317352
LinkDB
All DBs
Position
403:4328300..4329952
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AA seq
550 aa
AA seq
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MSKVELQARHWGWRQWLTLVVVIVLVGVSSVFPASTGYAAAIGVTDNGSTIVVNTGAGLV
YTVNKDNGDITSSKMNGIELSSSAGKGSHISSGLGSGADVTWNTSPSGSTVTIITKTSTL
THYYVSRSGENIIYMATYITAEPSVGELRYIFRGNGSVLTGVPAHSNIRNNTGAIESQDV
FGLSNGQTVSKYYGNDQAKDLSVRGVTGNGVGVFMAYGNREKSSGGPFFRDIQFQSGGDT
EVYNYMNSGHEQTEDWRLGLHGPYALIFTTGSTPSVPDFSWMSGLGLTGWVSSRGAVVLN
GLSGMVSGSTYTIGFANDNAQYWTTASSSGAAVRRDMIPGTYTMTVYKGELGVYKESINV
TAGNTTTINTRTISGDPASKPALWRIGTWDGTPLEFLNGQTIAVRHPSDSRNASWGPVTY
AVGGATNKFPAIQFRRQNSPTKITFTLTAAQASLPHVLNIGITAAYNNGRPSVTVNNTIL
SNPTASTQPNSRSFTIGTYRGNNTTFSWTIPASALVAGTNTISITPISGSSDLGNWLSAG
WVYDAVELLN
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaagttgaattacaagcaagacattggggatggcgtcagtggttgacgttagtt
gttgtcatcgtattagtaggagtatcgagtgtatttcctgcttccacaggatatgccgcg
gcgatcggtgtaacagacaatggatcaacgattgttgtaaatacaggtgcagggctagtc
tatacggtgaacaaagacaatggagatatcacatctagcaaaatgaatggaatcgaactc
agtagttcagcaggcaaaggttctcatatcagttcaggtctgggatcaggggcagatgtg
acatggaatacatctccttcaggttctacagtaacgatcattaccaagacgagcacatta
actcattattatgtgtcccgtagtggcgaaaatattatctatatggcgacgtacataaca
gcagagccttcggttggcgaactgcgttatattttcagaggtaacggaagtgtactgacc
ggtgttcctgcacattcaaatatccgcaataatacaggggcgattgaaagtcaggatgta
tttggattatccaacggtcagacggtatccaaatattatggcaacgatcaagccaaagac
ttgagtgtgcgtggagtgactggtaacggtgtaggtgtctttatggcgtatggtaatcgg
gagaaaagttcaggcgggccttttttccgggatattcaatttcagagcggtggagatact
gaagtctacaactatatgaattccggtcatgaacagacagaagattggcggcttggtctg
catggtccgtatgcgctgatctttactacagggtcaacgccaagtgtaccggactttagc
tggatgtctggactgggattaacaggttgggtatccagtcgtggagcggttgtattaaac
ggattatcgggtatggtgagcggttcaacgtatacgatcggatttgcaaatgataatgct
caatactggacaaccgcatcgtcgagtggagctgctgtccgccgtgatatgattcccgga
acgtatacgatgaccgtctacaaaggcgagttaggcgtgtataaagaaagtatcaatgtc
accgcaggtaacacaacaacgatcaatacaagaacaatttcaggtgatcctgcaagtaaa
ccagcattatggcgtataggcacatgggatggcacaccgctagagtttctgaatggacag
acgattgctgttcgtcatccatcggatagccgtaatgcaagttggggccctgtgacgtat
gcggtcggtggtgcaaccaacaaattccctgccattcaattcagaaggcaaaattcaccg
actaaaattacatttacgctgacagcggctcaagcatctttaccacatgtgctcaatatt
ggaatcactgccgcgtataacaatggtcgtcctagtgtgactgtgaacaacacaatatta
agtaatcccacagcatcgacacaaccgaattcacgtagctttacgattggaacatatcgt
ggcaacaacaccacattttcatggacgattcctgcttctgctctagtggcaggcacgaat
acgatctcgatcactccgatcagtggttccagtgatcttggaaattggcttagtgcaggg
tgggtgtatgatgcggtagagttgcttaattga
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