Paenibacillus nuruki: AASFL403_20175
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Entry
AASFL403_20175 CDS
T09651
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
pnk
Paenibacillus nuruki
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_20175
Enzymes [BR:
pnk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
AASFL403_20175
DNA repair and recombination proteins [BR:
pnk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
AASFL403_20175
Prokaryotic type
AASFL403_20175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
CAJ1317529
LinkDB
All DBs
Position
403:4515138..4516466
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AA seq
442 aa
AA seq
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MKLFIHRKDLRIHDLVGFNYIHESEAQSVHLLIIDPFLLRKGREKEHSGVNFLRHVHRLQ
KLYQSQHKTLHIVYGQPEVVLEHVLNKFDIDEVVTHRDFTPYAKDRDRKLKAVADQANVA
FTLLVDHMLIDVEQFTDFTGKDGFYKVFAPFHRKWLDFLDQHPNHASSISLKDLNVSRAE
LTLPAEFELPFALEEYEPAEDPEPILQTFIKSKMVNYGEERDYYSIDPSSDLNPHVTIGA
ISIRQMLDDALRAQGHEEWVRQISFRDFYLYQAIYDEHYFKYEHKYDLSELTDQHFEAWY
KGETGIPVIDASMRQLNETGRIHNRLRILSGMFLTKNLQCPFTLGEQYFRRKLLDYDNVI
NRGNWMWCASLGINSAPYFRVVNPVTQSTKYDPEGDYIREWMPELNDLSAKEIHQPQKNA
IVDLKISRASAIETYKKIVNNV
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
ttgaaattatttattcatcgcaaagacctgcgtatacacgatttggtcggatttaattat
attcatgaatctgaagcacaaagtgtacatctactcattatcgatccttttttattgcga
aaaggtagagaaaaagagcatagtggggttaattttcttcgtcatgtccatcgtttgcag
aagttgtatcaaagtcagcataaaacactacatatcgtttatggacagcctgaagtggta
ttggagcatgtgttgaataagttcgatattgacgaagtggtgacccaccgcgattttact
ccgtatgctaaagaccgtgatcgcaaattaaaagccgtcgcagatcaagccaatgttgcg
tttactttattggtggatcatatgttaatcgatgtcgagcagtttactgattttacaggc
aaagatggcttttataaagtatttgctccttttcaccgcaaatggttagactttctcgat
cagcatccgaatcatgcgtcgagtatcagtctcaaagacttaaatgtctctcgtgctgaa
ctcacattaccggcagaatttgagttgccttttgcattggaagagtatgagccagccgaa
gatcctgaaccgatcttgcagacgtttatcaaaagcaaaatggtgaattatggtgaagaa
cgagattattatagtattgatccgtccagtgacctgaatccgcatgtgaccatcggggca
atatcgattcggcagatgttggatgatgcgctacgagcacaagggcatgaagaatgggta
cgtcagatttcgttccgtgatttctatttgtatcaggcaatctatgatgagcattatttc
aaatatgaacacaagtatgatctatctgaattaacggatcagcactttgaagcatggtac
aaaggggagacaggtattccagttattgatgcttcgatgagacagttaaatgaaacaggg
cggatacacaaccgtttgcgaattttatcaggtatgttcttgaccaaaaatctacaatgt
ccgtttacactgggagagcaatatttccgtcgtaaattattggattatgataatgtgatt
aatcgagggaactggatgtggtgtgcttcattaggaattaattcggctccttatttccgt
gtcgtgaatccagtgactcagtcgaccaaatatgatccagaaggcgattatattcgagag
tggatgccagagttaaatgacttatctgcgaaagaaattcatcaacctcaaaaaaatgcg
attgtagatcttaaaatatctcgtgcgagtgctatcgaaacctacaaaaaaatcgtgaat
aatgtgtaa
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