Paenibacillus nuruki: AASFL403_20740
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Entry
AASFL403_20740 CDS
T09651
Name
(GenBank) DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
AASFL403_20740
09124 Replication and repair
03420 Nucleotide excision repair
AASFL403_20740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pnk03021
]
AASFL403_20740
03036 Chromosome and associated proteins [BR:
pnk03036
]
AASFL403_20740
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_20740
Enzymes [BR:
pnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
AASFL403_20740
Transcription machinery [BR:
pnk03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
AASFL403_20740
Chromosome and associated proteins [BR:
pnk03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
AASFL403_20740
DNA repair and recombination proteins [BR:
pnk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
AASFL403_20740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
HBB
ResIII
PhoH
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
CAJ1317642
LinkDB
All DBs
Position
403:4642301..4644595
Genome browser
AA seq
764 aa
AA seq
DB search
MTTVIDISVRTLVEYVYRTGSIESGFRVAQSMQEGTRIHKQIQEGYGEHGEKEVHLKTEI
AYHDLLFRIEGRCDGLWVDEQGLLTVDEIKSTSISAEDIGDGREVHWAQAQMYGYILAQD
RHLEQVRIQLTYVHKSSGKETKLERIQTRAQLQQFANDTVAEYAPYAEMIAKHRQKRNDS
IEQLAFPFAGYRSGQRKFAGAVYKTIGEKLNLFAEAPTGTGKTISTLFPAIKSIGSEQAE
RLMYVTAKTVTRANAEEALQRMESSGLNLHGVTITAKDKVCFCLANSTGGRDNCEYTEGY
YDRINGAILDMMSNETLMTRAVIEQYAQKHHLCPFELSIDSSYASDAVICDYNYVFDPKV
SFKRLSDDMRKKTILLVDEAHNLVDRGRNMFSAALNKSAFLDLKRDYKDSAESLAKISSA
INAYFIRLRKQGEDGKLIQRQQAPEEIFPLLEEFVIRAEVTLLEQGDQGDIQLLLETYFA
VQAFLRIGRLYDMESHMTYAEVQGSDVHLRMFCIDPSLQLRQTAKGYRSVIHFSATLSPI
RYYRDMLGAEEDDYNISIPSPFSREQLEVQIVPLSTRYRDRERTRTELANVLAQLINKRP
GNYLAFFPSYQYMQDVIDIFETLDVETDVLIQQSGMAEEERDRFLNAFQSDNPRTLTGFA
VMGGIFSEGIDLAGDRLTGVIIVGVGLPQIGPERELIREHFSQAGFNGFDYAYVYPGMNK
VLQAGGRLIRTEEDRGLLMLVDDRFLQRPYYQLLPTEWRSDSQP
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccgttatcgatatttcagtacggactttagtggaatatgtgtatcggacaggt
agtatcgaatcaggcttccgtgtcgctcagtcgatgcaagaaggaacacgtattcacaaa
cagattcaagaaggatacggcgaacacggggaaaaagaagtccatctcaaaaccgaaatc
gcttatcatgatctgctctttcggatcgaagggcgctgcgatggattatgggtggatgaa
caagggctactcactgtcgatgagatcaagtccacttcgatttcagcagaggatattgga
gacgggcgagaggtgcactgggcgcaagcacagatgtacggttatatcctcgcacaagat
cgtcatctggaacaggtgagaatccaattaacttatgtacacaaaagcagtggcaaagag
accaagcttgaacgtatacagacccgtgcacaactacaacagtttgctaacgatacggta
gctgaatatgcaccttatgcggaaatgatcgccaagcaccgtcagaagcgtaacgatagt
attgagcagttagcgtttccttttgccggttaccgatccggtcaacgtaaatttgcagga
gcagtctacaaaacaatcggtgagaaactgaatttatttgccgaagcaccgacaggaaca
ggtaaaacgatttcgacgttatttccagcgatcaaatcgatcggaagcgagcaagcagaa
cgattgatgtatgtgactgccaaaacggtcaccagagccaatgccgaagaagcactacaa
cggatggaaagcagtggcttgaatctacatggagtgacgattactgccaaagacaaagtc
tgcttctgtttggcaaatagtacaggcggacgcgataattgcgaatatacagaaggttac
tatgaccgtattaatggcgctattcttgatatgatgagtaatgaaacactgatgacccgt
gcagtgatcgaacaatatgcgcaaaaacatcatctatgtccatttgaattatcgattgat
tcttcgtatgcgtcagacgctgtcatttgcgattataactatgtgtttgatccgaaagtt
tcattcaaacgtttatccgatgatatgcgtaaaaaaacgattttgttagtcgatgaagcc
cataatctggtcgatcgtggacgcaatatgttttcggcagcattgaacaagtctgctttt
ctggatttgaaaagagattataaagactcggcggaatcgttagccaaaatctctagtgcg
atcaatgcgtactttattcggttacggaagcaaggcgaagatggcaagttgatccagcga
caacaagccccagaagaaattttcccactgttagaagagtttgtgattcgagctgaagtt
accttgctagagcaaggagatcagggggatatccagttgttgctggaaacgtattttgcg
gtgcaggcttttctacgaattgggcgattgtatgatatggagagtcatatgacgtatgcg
gaagtgcagggtagtgatgtgcatttacggatgttctgtattgatccttcgctacaactt
cgacagacggctaaaggatatcgctcagtgattcacttctcagcgacattatctccaatt
cggtattaccgcgatatgttaggggcagaggaagacgattataatatttcgattccatct
cctttttcacgagaacaattggaggtacagattgtaccgttgtctacacgttatcgggat
cgggagcgtacacgaacagaacttgcaaatgtactggctcaactgatcaataagcgacca
ggcaattatttagcttttttcccttcttatcaatatatgcaagatgtgattgatattttt
gagacattagatgtagaaacagatgtattgattcagcagtctggaatggcagaagaagaa
cgagaccgttttctgaatgcttttcaaagtgataatccgcgtaccttaacagggtttgcg
gtgatgggtggaatattcagtgaagggattgatctagcgggtgatcgcctaacaggtgtc
attattgtcggtgtagggctaccacagattggacctgagcgagaattgattcgtgagcat
ttcagtcaggctggattcaatggattcgattatgcgtatgtctatcccggaatgaacaaa
gtccttcaagcgggaggtcgcctgattcgtaccgaagaagatcggggactattgatgctg
gtggatgatcgctttttgcaacgtccttattatcagttgttaccaacagagtggcgtagt
gattctcagccataa
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