Paenibacillus nuruki: AASFL403_22180
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Entry
AASFL403_22180 CDS
T09651
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk00521
Streptomycin biosynthesis
pnk00523
Polyketide sugar unit biosynthesis
pnk00525
Acarbose and validamycin biosynthesis
pnk00541
Biosynthesis of various nucleotide sugars
pnk01100
Metabolic pathways
pnk01110
Biosynthesis of secondary metabolites
pnk01250
Biosynthesis of nucleotide sugars
Module
pnk_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
AASFL403_22180 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
AASFL403_22180 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
AASFL403_22180 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
AASFL403_22180 (rfbB)
00525 Acarbose and validamycin biosynthesis
AASFL403_22180 (rfbB)
Enzymes [BR:
pnk01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
AASFL403_22180 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
adh_short
Sacchrp_dh_NADP
NmrA
DUF3862
KR
Motif
Other DBs
NCBI-ProteinID:
CAJ1317930
LinkDB
All DBs
Position
403:4977028..4978050
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AA seq
340 aa
AA seq
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MKLLVTGGAGFIGSNFVLYMLREHPEYQIVNVDALTYAGNLENLKSIEGNPNHTFVKADI
ADTATMDRLVADGVDIIVNFAAESHVDRSILEPEIFVKTNVVGTQALLDVAKKYNITKFV
QVSTDEVYGSLGETGLFTEETPITPNSPYSASKAGGDLLVRAYHETFGLPVNITRCSNNY
GPFQFPEKLIPLIISRSLADEALPVYGDGLNIRDWLYVEDHCSAIDLVIHEGKNGEVYNI
GGNNERTNIHIVKTILEQLDKPESLIKYVEDRLGHDRRYGIDPTKIMNELGWKPKHNFET
GIKETIQWYLDNKDWWTRIASGAYQEYYQQQYGDRLGASQ
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacttgttactggcggagccggttttattggtagtaacttcgttttatatatg
ctacgcgaacaccctgaataccagatcgttaacgtagatgctcttacttatgcaggaaat
cttgaaaatttaaaatcgattgaaggcaatcctaaccatacatttgtgaaagccgatatt
gcagatacagcaaccatggatcgcttagttgcagatggtgtagatatcattgttaacttt
gcagcagaatcgcatgtagatcgtagtattttggaacctgaaatttttgtgaaaacaaat
gttgtaggtactcaagcccttctggatgtggctaaaaaatataacatcaccaagtttgta
caagtatctacagatgaagtatacggttctttaggcgaaacagggctctttaccgaagag
acaccgattacaccaaatagcccgtattcagcaagtaaagcaggtggagacttattagta
cgcgcataccatgaaacatttggtttgccggttaatattacacgttgctctaataactat
ggtcctttccaattccctgagaagttgattccattgattatttctcgttctttggcagat
gaagcattgcctgtatatggggatggacttaatatccgcgattggttgtatgtagaagac
cattgcagcgcgatcgatctagttattcatgaaggcaaaaatggagaagtctacaatatt
ggtggtaacaatgaacgtacaaatatccatatcgtcaaaacaattttggaacaactggat
aaaccagaatcgttgatcaaatatgtagaagatcgtttgggtcatgatcgtcgttatggt
attgatcctactaaaattatgaatgaactgggatggaagcctaagcataatttcgaaaca
gggattaaagaaacgattcaatggtatttggataacaaagactggtggacacgtattgct
tctggagcgtatcaagaatattaccaacagcagtatggtgatcgtctaggagctagtcaa
tga
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