Paenibacillus nuruki: AASFL403_22210
Help
Entry
AASFL403_22210 CDS
T09651
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pnk
Paenibacillus nuruki
Pathway
pnk03420
Nucleotide excision repair
pnk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pnk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AASFL403_22210 (pcrA)
03430 Mismatch repair
AASFL403_22210 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pnk03400
]
AASFL403_22210 (pcrA)
Enzymes [BR:
pnk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AASFL403_22210 (pcrA)
DNA repair and recombination proteins [BR:
pnk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AASFL403_22210 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
AASFL403_22210 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
APAF1_C
GBS_Bsp-like
Motif
Other DBs
NCBI-ProteinID:
CAJ1317936
LinkDB
All DBs
Position
403:4983486..4985822
Genome browser
AA seq
778 aa
AA seq
DB search
MNTVNIQEAINRLNPRQKEAALATDGPLLIMAGAGSGKTRVLTHRIAHIIDARKSAPWGV
LAITFTNKAAREMQERVSRLVGPAGREIWVSTFHSMCVRILRKDIERIGFTSNFSILDSS
DQLSVIRSCMKDLNIDTKKFEPKAVQSMMGTAKNELVSPAQYEQKIGDYFEGIVAKVYTK
YQQRLRANNSLDFDDLIMKTIQLFNEVPEVLEFYQKKFRYIHVDEYQDTNKAQYMLCKML
AEAHHNICVVGDSDQSIYRWRGADISNILNFEEDYPEAKTILLEQNYRSTSNILSAANEV
IGNNTGRKPKKLWTDKEGGAKIKVYLADSEHDEGYFVTSEIHKSVKTGQPYRNHAILYRT
NAQSRVIEEILIKSDIPYQIVGGIKFYDRKEIKDLLGYLRLLSNPDDDISLTRIINVPKR
GIGDTTVAKLAVAAAEKGVSIFKVLEIVDDLGFAGRTRNMLVEFYDMIASLHQMVEYLSV
TELTEKILELSEYRVELERENTLESKARLENIEEFLSVTMEFEKNNEDRSLISFLTDLAL
IADIDTVGDEPEEDDDAVVLMTMHSAKGLEFPTVFIIGMEEGVFPHSRAFQDNEELEEER
RLAYVGITRAEKNLFLSCAQMRTLFGRTTANPPSRFLEEIPEEYKEDTAGAPNYRRGGAS
RGGSSYGSGNRSFGGSTSSFGGKRENTAAFGSGSSARAVPSTNARVTVTTGATPKPVASG
GGSDSFQAGDKVSHGKWGIGTIVAVKGTGNDMELQIAFPAPTGLKRLLAGFAPITKVE
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaatactgtgaatatacaggaagcaatcaatcgattgaaccctagacaaaaagaagcc
gcactcgcaacagatggaccgctattgattatggctggtgcaggtagtggtaaaacacgc
gtgctgactcaccggattgcccatattattgatgcacgcaaatcagcaccatggggtgta
ctagcaattacgtttacgaataaagccgcacgtgaaatgcaagaacgtgtttctcgtttg
gtaggtcctgctggtcgtgagatttgggtatctacttttcactcgatgtgtgtgcgtatt
ttacgtaaagatatcgaacgtatcggattcacatctaacttctctatcttagattcttcg
gatcaattatctgttattcgctcttgtatgaaagacttgaatattgataccaaaaagttt
gaacctaaagcagtgcaatctatgatgggcacagccaaaaatgaattagtctctcccgct
caatatgagcaaaagattggtgactattttgaaggcattgtagccaaagtctataccaag
tatcaacaacgtctacgtgcgaataactccttagactttgatgatctcattatgaagacg
attcaattgtttaacgaagttcctgaagtactagaattttatcaaaagaaattccgctat
attcatgtcgatgagtatcaagatacgaataaggcccaatatatgctttgtaaaatgtta
gcagaagctcatcacaatatttgtgttgttggagatagtgatcagtcgatctatcgctgg
cgtggagcagatatcagcaacattttgaattttgaagaagattatccagaagccaaaacg
attttgttagaacagaattatcgttcgacttctaatatactaagtgcagcaaatgaagtg
attggcaacaatacaggacgtaaaccgaaaaagctatggacagataaagaaggcggagcc
aaaatcaaagtatatcttgctgattctgagcatgatgaaggatactttgtcacttctgag
attcacaaaagtgtgaaaaccgggcaaccttatcgcaaccatgcaattttgtatcgtacc
aatgcgcagtcacgggttatagaggaaattttgatcaaatcggatatcccttaccaaatc
gtgggcggtataaagttctatgatcgtaaagagatcaaagacttactcggctatttacgt
ttgctttcgaatccagatgatgatattagtttaactcgaattatcaatgtgcctaagcgt
ggtattggtgatacgacagtagccaaattagcagtagcagcggcagaaaaaggcgtttct
atttttaaagtattagaaatagtagatgatctaggttttgcaggtcgtacacgtaatatg
ttggttgaattttacgatatgattgcttcacttcatcaaatggtagagtatttatcggtt
accgaattaacggagaagattctagagttatctgaataccgtgtagagttagaacgtgag
aatacactagagtccaaggctcgcttagaaaatatagaagagtttttatctgtaacgatg
gaatttgaaaaaaataacgaagatcgttcactgatttcatttctgactgatctagcatta
atcgcagatattgatacggtaggcgatgaacctgaagaagatgacgatgctgttgtattg
atgacgatgcatagtgctaaaggtttggaattcccaactgtatttattataggcatggaa
gaaggcgtattcccgcatagtcgagcttttcaagataatgaagagttggaagaagaacgt
cgtctagcgtatgtaggcattacacgagcagagaaaaatctattcttatcttgcgcacag
atgcgtactttatttggacgaaccactgcgaatccaccttcacgctttttggaagaaatt
ccagaagagtataaagaagatacagcaggagctcctaactatcgtcgtggtggagcatcg
cgcggaggaagtagttatggatcaggtaatcgtagctttggaggtagtacgagcagcttt
ggtggtaaacgcgaaaatacggctgcttttggtagtggatcatctgcacgtgcggtacct
tctaccaatgcacgagtgactgtgacgacaggagctacacctaagcctgttgcttctggt
ggaggttcagatagtttccaagcaggcgataaagtgtctcatggcaaatggggcattggc
acaatcgtagcggttaaaggaacaggcaacgatatggagttacaaattgctttcccagcg
ccgacaggactcaaacgattgttagcaggctttgctcctattactaaagtagaataa
DBGET
integrated database retrieval system
