Candidatus Protochlamydia naegleriophila: PNK_0002
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Entry
PNK_0002 CDS
T04212
Symbol
ispA
Name
(GenBank) geranyltranstransferase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
pnl
Candidatus Protochlamydia naegleriophila
Pathway
pnl00900
Terpenoid backbone biosynthesis
pnl01100
Metabolic pathways
pnl01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
pnl00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
PNK_0002 (ispA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pnl01006
]
PNK_0002 (ispA)
Enzymes [BR:
pnl01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
PNK_0002 (ispA)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
PNK_0002 (ispA)
2.5.1.29 geranylgeranyl diphosphate synthase
PNK_0002 (ispA)
Prenyltransferases [BR:
pnl01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
PNK_0002 (ispA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
YnfE
Motif
Other DBs
NCBI-ProteinID:
CUI15641
UniProt:
A0A0U5J6G8
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All DBs
Position
cPNK:1405..2301
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AA seq
298 aa
AA seq
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MQITRPSFSSILEPYKRQIEELIQANIATLGSKTLLRDACEYALLNGGKRFRPALVLMIA
KALNFQVDVSQAALGVEYFHTASLIADDLPCMDNDDERRNKPALHKVYGESVALLATYAL
IAAGYQCLARNAASLAGSAHPFANQSDRLCVLALENATHNTGILGATGGQFLDLTPPDLS
LSTLREVIDKKTVTLFEISFVFGWIFGGGDLEQLPLVKKSAAHFGMAFQVADDLGDMAQD
LSHEHTMNFANVYGKDSAVALFHEEIEQFKQTLQELSLSSEELQALSALLIEQVNHLA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgcaaataactagaccttccttttcctccattttagagccctataaacggcaaatcgag
gaattaattcaagcgaacatcgctactctaggtagcaaaacattgctcagagatgcctgc
gaatatgccttattgaatggaggaaagcgatttcggccagctttggttttgatgattgcc
aaagcgttgaattttcaggtcgatgtgtcgcaagcggctttaggtgttgaatactttcac
acagcttctttgattgccgatgacttgccttgcatggacaatgatgatgaaaggcgcaat
aagccggcattgcataaggtttatggtgagtctgtggctcttttggctacttatgccttg
attgcggctggctatcagtgtttggcccgcaatgccgcttcattggcaggcagtgcccat
ccttttgccaatcaaagcgatcgtctctgcgtgctggctttagagaacgcgacccataat
accggcattttgggagcgacgggggggcagtttttagatctcactccgccagacctttct
ttgtcaactctcagagaagtgatcgacaaaaagaccgtgactctattcgagatttctttc
gtttttggatggatttttggtgggggcgacttggagcagcttcccctggtcaaaaagagc
gctgcccattttggcatggcttttcaggttgccgacgatttaggagacatggcacaagat
ctctcgcatgaacatacgatgaattttgccaatgtctatggcaaagattctgccgtcgcc
cttttccatgaagagattgaacagttcaagcaaactttgcaggaactcagcctctcatca
gaagaattgcaagccttgagcgcgcttctcattgagcaagtgaaccaccttgcctga
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