Candidatus Protochlamydia naegleriophila: PNK_0364
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Entry
PNK_0364 CDS
T04212
Name
(GenBank) hypothetical protein
Organism
pnl
Candidatus Protochlamydia naegleriophila
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SNF2_assoc
DEAD
SWI2_SNF2
SWIM
NCH2
Motif
Other DBs
NCBI-ProteinID:
CUI15998
UniProt:
A0A0U5J982
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All DBs
Position
cPNK:457000..460491
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AA seq
1163 aa
AA seq
DB search
MLNFRKLKHDFSPTIIKEGKSLYDKGMVVSSKIINLKPDMVRFSCRVMGSFDNCYESELE
IDRHESVIIDSDCDCTYKYDCQHLAAVLFYLEAHYNQILVAYSKETDLEKATHVDDQEKE
RLRETFKEAETKEHARQDKKFQKELLEEYINASQLLGQASFFHPEEEIAQDKAELAVVFT
PPQKGCDQIEIQLSLRLPFRSKSLNISQIKTFIDAIRYNEALYIGSKRYFFSISSFDEAS
AEILKLIIDFARFTDNKGDKQQRSAYIDIEAFGTLLAVSYAIAETRFASSAPLNDHGPEL
YPMPCIYCSTIEEPLKLAINTAMLRFELDYLEVNAPKILLKPKIVLQNRHIIDCEEALLF
ECAKPGMIYQNTYYRFKSLIKRKHLRSLPAIRDMTIPEPLFGTFVENALSELMRFAEIAH
KDIIERFVTLPFVEKVGAECDIHYLNGELEASLNFVYGSVKVPAATSQLTVEHISTFVTP
EGILARNLTEEQKITDHLFQDFVFDPSQGIYSAKNDKKIVEFMTEVIPANQHRVKFNCPE
NLLDQFIYDDSTFYLSLKESSRIDMYEVEVKVDGYLNGVTVDLLWDCLSSKRAFIELSAK
KTSKRKTKVEENKAPYKILVLDLEKLAPVVQIFDEMGINRLDAHSEQRPLWSLASLDVEQ
FSGLPVEFSMTEKLQEIQQQMLGHVPCKARDIPSVIQASLRNYQVEGIKWLDRLRGMHLN
GILADDMGLGKTLQAIITLTQYKLDHPEQPSIVVCPTSLVYNWKEEFAKFNPELRVLPVD
GNPSQRKKLLSDIDQYDIIITSYTLLQKDIEFYKTVPFGYIILDEAQHIKNRGTRNAQSV
KMIQAAHRLILTGTPIENSLEELWSLFDFLMPGLLSSYDRFVEKYIRQSATLQSGKNLDN
LRRKVAPFILRRMKRDVLDDLPPVSEIVYHCHLSDVQQELYRSYAASAREELSQLVKKEG
FDRVQIHVLATLTRLKQICCHPAIFAKDKPESGDSSKYEMLLELLQTLMESKHKTVIFSQ
YTRMLNIMREDLQKQGIRFEYLDGSSKNRLSIVKKFNEDHNIPIFLVSLKAGGSGLNLVG
ADTVIHYDMWWNPAVENQATDRVHRLGQKNSVSSYKLITLNTIEEKILDLHNRKKSLVKE
VVSRDEDMIAKLTWEEVLELLQT
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgttaaattttcgaaaacttaagcacgatttctcacctacaatcattaaagagggtaaa
tccctctatgataaggggatggtcgtttcttccaaaattattaacttaaaacccgatatg
gtgcgctttagctgccgtgtgatgggaagttttgataattgttacgagtctgagcttgaa
atagaccggcatgaatctgttatcatcgattcagattgcgactgcacgtataaatacgac
tgccagcatttggctgctgtcttattttacttagaagcccactacaatcaaattcttgtc
gcctattccaaagagaccgatttggaaaaagctactcacgttgatgaccaagaaaaagaa
cgcctaagggaaacgtttaaagaagcagaaacaaaagagcatgctcggcaagacaaaaaa
tttcaaaaagaattgcttgaagagtatattaatgcctctcaattgcttggccaagcctct
ttctttcatcctgaagaggaaattgctcaagacaaggctgagttggcggttgtctttaca
ccgcctcaaaaggggtgcgatcaaattgaaatccaattatcgcttcgcttgccttttcga
tcgaagtccttgaatatttcgcaaattaagaccttcattgatgcgattcgctataatgaa
gcgctttatatcggcagcaagcgttatttcttctcgattagttctttcgacgaagcgagt
gctgaaattcttaagctgatcatcgactttgcaagatttaccgataataaaggtgataag
cagcagcgttcggcctatattgatatcgaagcttttggaacactgcttgccgtttcttat
gccattgcagagactcgattcgcttcgtcagctcctcttaatgaccacggccctgagcta
tatcctatgccttgtatttattgcagcacgattgaggagccgcttaaattggccatcaat
acggcaatgctacggttcgagctggattatttagaggttaatgcccccaagattttactt
aagccaaaaattgtgttgcagaaccggcacattattgattgcgaggaagcgctactgttc
gagtgcgccaagccgggaatgatttatcaaaatacttattaccgattcaaatcattgatc
aagcgcaagcatttgcgtagtttgccagctattcgcgatatgaccattccagagccatta
tttggaacgtttgtagagaatgcgctctctgaattaatgcgttttgcagaaatcgcacat
aaagacatcattgagcgttttgtaacacttccctttgttgagaaggttggtgcagaatgt
gatattcattatttgaatggggaattagaagcgtctctcaacttcgtttatggcagcgtc
aaggtaccagctgcaacttcccagttaacagttgagcatatatcgacatttgtgactcca
gagggaattttggcacgcaatctgactgaagaacagaagatcacggaccatcttttccaa
gattttgtttttgatccttctcaaggcatctacagtgctaagaatgacaagaaaattgtt
gaatttatgaccgaggtcattcctgctaatcagcaccgcgtaaaattcaattgtcctgaa
aatttgcttgatcaattcatttatgatgattcgacgttttatttgagtctgaaagaatct
agtcgaattgatatgtatgaagtagaagtgaaagtcgatggttacttaaatggagtgacg
gttgatttactttgggactgcctttcttctaagcgcgctttcatagaactatcagctaaa
aaaacgagtaagcgcaaaactaaggtagaagaaaataaggctccttataagatcttagtc
ctggatttggaaaaacttgcacctgttgttcaaatttttgatgaaatgggaatcaatcgc
cttgatgctcacagtgaacagcgtcctttatggagtttggcaagtttagacgtcgagcag
ttttccggacttcccgttgagttttccatgacagaaaaactccaagaaattcagcagcaa
atgctcggacatgttccttgtaaggcaagagatattccatccgttattcaagcctcattg
cgcaactatcaagttgaggggatcaaatggcttgatcgtttacgaggcatgcatctcaat
ggtattttggcagatgacatgggccttggtaaaactctccaggcgattattactttaacg
caatataagctggatcacccggagcagccctcaatcgtggtttgtccaacatctcttgtt
tacaactggaaagaagagtttgccaaatttaatccagagctcagagtcttgcctgtcgac
ggcaatccaagtcagcgcaaaaagcttttgagtgatattgatcaatatgacatcatcatt
acctcttatacgcttttgcaaaaagatatcgaattctataagaccgttccttttggctat
atcattttggacgaagctcagcacatcaaaaaccgggggactcgcaatgcgcaatcggtt
aaaatgattcaagcggcccaccgcttgattttgacgggtacgcctattgagaattcgctg
gaagagctgtggagtctttttgacttcctcatgccaggacttttaagttcatatgaccgc
tttgttgaaaagtacattaggcaatctgcaacgctgcagtctggcaaaaatctcgacaat
cttcgccgaaaggtggctccatttattttacgccgcatgaagcgcgacgttttagatgat
ttgccgcctgtttccgagattgtctatcactgccatctctcagatgtacagcaagagctc
tatcgttcttatgccgcctctgctcgtgaagaattgtctcagctggttaagaaagaaggg
tttgaccgcgtgcaaatccacgtgctggctaccttgacacggcttaaacaaatttgctgc
catccagcgatttttgccaaagataagcctgagagcggggattcttccaagtatgagatg
ttattagagctcttacagactttaatggaaagtaagcataagacggtcattttcagccag
tatacacgcatgttgaacatcatgcgggaagatttacagaagcaggggattcgcttcgaa
tatttagatggttcaagtaaaaatcgtcttagtattgttaaaaaattcaacgaagatcac
aatatccctattttcttggtttctttaaaggctggaggctcaggacttaacttagttgga
gccgatactgtcattcattatgacatgtggtggaatccagctgtagaaaatcaagcaacg
gatcgcgtccatcgtttagggcaaaaaaattcagtttcctcgtataagctcattacctta
aatacgatcgaggaaaaaatattggatctacataaccgcaagaaaagtttagtaaaagaa
gtggttagccgagatgaggatatgattgcaaaattgacgtgggaagaggtgttagagctg
cttcaaacatag
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